Gene Noca_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1170 
Symbol 
ID4599345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1243526 
End bp1244791 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content67% 
IMG OID639775765 
Producthypothetical protein 
Protein accessionYP_922372 
Protein GI119715407 
COG category[S] Function unknown 
COG ID[COG5441] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGCA AGGCTGTCGT GTGCCTCGCC GGGACCTTGG ACACCAAGGG TGCGGAGTAC 
GCCTATGTCA AGGACTGTCT GCTCGCTGCC GGGGTGGACG TCCACGTCAT CGACTGCGGC
GTCCTCGGGG AGCCGGGCTT CACGCCGGAT GTCGACGCGG TGCAGGTTGC CGAGCGGGCC
GGCATCCGTC TCGAGGACTT CCAGTCCGGG GTCGAGGGCG CCGGTGGTCG GGTCCTGGCC
GTGACGAAGA TGAGCGAGGG TCTTCAGCAG GTTCTCGAGG AGCTGGTGAG CCAGGACCGC
ATCGATGCGG TTGTCGGTCT CGGTGGGACG GGTGGCACCG ACCTCCTCAG CGGGGCGTTC
AAGAACCTCG GCCTGGGCTT CCCCAAGCTG ATCGTCAGCA CGATGGCGTC CAACAACACC
CGTCCCTACG TCGGCCACTC CGACCTGCAC ATGGCCAACG CCGTCACCGA CATCGCCGGG
CTGAACAGCA TCTCCAAGCA GGTGCTCGGC AACGCGGCGA ACGGTGTCGC GGGCATGGCC
ATGGGGCGGG CGCGCATCCG GGCGCAGGCC GAAGCCAGCA AGCCGCTGAT CGCCGTCTCG
ATGTTCGGCG TGACCACGCC GGGTGTCATG CGGGTTCGAA GCCGGCTGGA GGCCGAGGGC
TTCGAGGTCG TCACCTTCCA CGCGGTCGGC GAGGGTGCCG GCATGGAGCA CCTGATCGAC
CAGGGCGCCA TCGACGGACT CATCGACTAC ACGCTCCCCG AGGTGCTCAA CCACTGGAAC
CACGGCATCT TCGATCCCGG GTGCGAGCGC ATGGAGGCCG CGATCCGGTC GGGCATCCCG
CAGGTGGTCG TGCCGGGTGC CATGGAGTGC TTCAACTTCG GCGCGGTGGA CACGATCCCC
GCCGAGTTCA ACACCCCGGA ACGCAATGTG CTGGTCCACA ACCCGAACAT CACCTCGCTC
CTCGCCACTC CCGAGGAGCT CGTCAAGCTC GGCGAGTACC TTGCCGAGCA CGTCAACCAG
GCACCCGGTC CCAAGGCGGT CGGACTGCCG CTGGGCGGCC TCGACAACTA CTTCAAGGAG
GGCAGTCAGT GGCACGGCGT CGACGTCACG CCGCTGTTCG ACGCCGTCCG TCGGACCCTC
GACCCCGGCA TCGAGCTCAT CGAGATGGAG AGCAACATCA ACGACGCGGA GTTCGCGGAC
GCGATCTTCG ACCTGTTCAT GAAGCAGTGG GCCGCACGCG AGCAGCCGGC CGCGGCAGTC
GGGTGA
 
Protein sequence
MERKAVVCLA GTLDTKGAEY AYVKDCLLAA GVDVHVIDCG VLGEPGFTPD VDAVQVAERA 
GIRLEDFQSG VEGAGGRVLA VTKMSEGLQQ VLEELVSQDR IDAVVGLGGT GGTDLLSGAF
KNLGLGFPKL IVSTMASNNT RPYVGHSDLH MANAVTDIAG LNSISKQVLG NAANGVAGMA
MGRARIRAQA EASKPLIAVS MFGVTTPGVM RVRSRLEAEG FEVVTFHAVG EGAGMEHLID
QGAIDGLIDY TLPEVLNHWN HGIFDPGCER MEAAIRSGIP QVVVPGAMEC FNFGAVDTIP
AEFNTPERNV LVHNPNITSL LATPEELVKL GEYLAEHVNQ APGPKAVGLP LGGLDNYFKE
GSQWHGVDVT PLFDAVRRTL DPGIELIEME SNINDAEFAD AIFDLFMKQW AAREQPAAAV
G