| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1142 |
|---|
| Symbol | |
|---|
| ID | 4599317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1213911 |
|---|
| End bp | 1214780 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639775738 |
|---|
| Product | urate oxidase |
|---|
| Protein accession | YP_922345 |
|---|
| Protein GI | 119715380 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3648] Uricase (urate oxidase) |
|---|
| TIGRFAM ID | [TIGR03383] urate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.207061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA CGGACGGGTC GAGGATCGTG CTCGGCGCCA ACCAGTACGG CAAGGCCGAG
GTGCGGCTGC TGCGGGTCGA CCGGGCGAGC GAGCGGCACA CGATCGAGGA CCTCGGCATC
ACCACCCAGC TGCGCGGTGA CTTCGAGGCC TGCCACACGC ACGGTGACAA CAGCCAGGTC
GTCCCCACCG ACACCCAGAA GAACACCATC CAGGCGTTCG CCCGGGACGG CATCGGCGCG
CCCGAGCACC TCCTGCTCCG GCTGGCCCGG CACTTCACCG ACGGGTTCGC GTGGGTCACC
GGCGGCCGGT TCGACGCCGA GTCCTACGCC TGGGAGCGGA TCGGGCTGCC CGACGGGTCC
GGCCACGACC ACTCCTTCGT CCGCACCGGG CGGGAGACCC GCACCGCGAC GGTCGAGGTC
GACGGCGACG AGGTGGTGGT CACCGCCGGG CTCACCGACT GCACCGTGCT GAAGTCCACC
GGCTCGGAGT TCCACGGCTT CTCGCGCGAC CGCTACACGA CGCTGCCGGA GACCACCGAC
CGGATCCTCG CCACCAGCAT CGCCGCGACC TGGCGCTACG CGACGACCGA GGTGGACTTC
GACGCGCGGT ACGCCGGGGT CCGGGACACC CTGCTCGCGA CCTTCGCGAC CACGCACTCC
CTGGCCCTGC AGCAGACGAT CTTCGAGATG GGCAAGGCGG TCCTCGAGCG GTACGACGAC
GTCGCCGAGG TCAGCCTGTC CTGCCCGAAC AAGCACCACT TCCTCGTCGA CCTCGAGCCG
TTCGGGCTGG ACAACCCGGG CGAGGTCTTC TTCCCCGCCG ACCGGCCCTA CGGCCTGATC
CAGGCGACCG TGCGCCGCGA GGGCGCCTGA
|
|---|
| Protein sequence | MATTDGSRIV LGANQYGKAE VRLLRVDRAS ERHTIEDLGI TTQLRGDFEA CHTHGDNSQV
VPTDTQKNTI QAFARDGIGA PEHLLLRLAR HFTDGFAWVT GGRFDAESYA WERIGLPDGS
GHDHSFVRTG RETRTATVEV DGDEVVVTAG LTDCTVLKST GSEFHGFSRD RYTTLPETTD
RILATSIAAT WRYATTEVDF DARYAGVRDT LLATFATTHS LALQQTIFEM GKAVLERYDD
VAEVSLSCPN KHHFLVDLEP FGLDNPGEVF FPADRPYGLI QATVRREGA
|
|---|
| |