Gene Noca_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1132 
Symbol 
ID4599385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1200208 
End bp1200930 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content73% 
IMG OID639775728 
Productfimbrial assembly family protein 
Protein accessionYP_922335 
Protein GI119715370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCA AGCGTTCGGA GACTGGGGCC CCGCCGGCCG TCAACCTGCT CTCGGAGTCG 
GCGTTCGTCC GGTTGGCGGC CCGCCGGCTG CGGCAGCGGT TCGTCGCCGG AGGAGTCGTG 
ATGGTGCTGC TCGTCGGCGG CGCGTGGACC TTCCAGCACC TGCGGGTCGA GGAGGCTCGC 
AAGGTCGTCG CCGTGGAGCA GGCGGAGACG ACGCGACTGA CCGGGCAGAC CCAGGTGCTC 
GCACCCGTCC GCACGTTCGT GAACGGCGTC GCGGTGCAGC AGCGCACGGT CGAGACCGCC 
ATGGCCGACG AGGTCTACGT CTCCGACGTC CTCGACGGCG TGCGCGACGC GACCCCGCTG 
GGCGCGCAGA TCACGACCGT CGCCGTGACG ATCGCGGCGA CCACCGGCGT CGGCGGCGCG 
CCCGTCCCGG GCGCCGCGTC GGCCTGTCCC GGTCCGGACC CGTTCAACAC CCGCACGGTG 
GTCGGCTGCG TGACGCTCTC CGGTACGGCG GGCAGCCGCG CCGAGGTCGG CGACATGGTG 
ATCGCCCTCG GCGCCTCGCA CCTGTTCGTC GAGCCGTTCA TCTCCACGAC GACCACCGGT 
GACGGCGAGG CGGTGACCTT CAGCGGGTCG GTCGGCCTGT CGGAGCAGGT CTACAGCGGC 
CGGTACGCCA GCACCGACGC CACCGATGCC AGCACCAACG CCAGCACCGA GGGAGGCTCG 
TGA
 
Protein sequence
MSRKRSETGA PPAVNLLSES AFVRLAARRL RQRFVAGGVV MVLLVGGAWT FQHLRVEEAR 
KVVAVEQAET TRLTGQTQVL APVRTFVNGV AVQQRTVETA MADEVYVSDV LDGVRDATPL 
GAQITTVAVT IAATTGVGGA PVPGAASACP GPDPFNTRTV VGCVTLSGTA GSRAEVGDMV 
IALGASHLFV EPFISTTTTG DGEAVTFSGS VGLSEQVYSG RYASTDATDA STNASTEGGS