| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1123 |
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| Symbol | |
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| ID | 4599376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1188975 |
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| End bp | 1190732 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639775719 |
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| Product | hypothetical protein |
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| Protein accession | YP_922326 |
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| Protein GI | 119715361 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.12304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTCGAT CAGCTGACCG CCGCCGCGAT GACGGGTTCA CCCTCATCGA GATCATCGTC
GCGCTCGGCG TGATCATGAC GGTGATGGCC GCCGTGCTGC CCCAGCTGCT GGTCGGCATC
AGGTCCGGCG AGACCTCCCG ACTGGTGACC CAGACCAAGG GCGTCGCCCA GGGCCAGCTC
GAGCGGATGC GCAACCTGCC GTATCACGTC GCCCCCGAGG CCGGCGACTA CCGCGACGTG
CTCGACTACT ACTTCCGCAA CCTCACCACC CCCGGACCGA TCACCTGCAC CGACCCGGAC
GGGCTCGCGA TGCCGACGAC CGCGTGGACC GGCTACGTCC CCGCCGACGG CGCCCGCTGC
TCCTATGAGC CGCAGTCCGG GGAGATGTAC CGCTACGTGG TCCCGCACCC GGCCACCGGG
ACCGATCCGC TCGCGGGCTT CCAGGTCGTC GTCGACACCC AGTTCCTCTC GGCGCCGAAG
TCCGACGGGA GCTCCGACGT GCTCGCGCCG CCCTCGGGCT ACAACACCCA GAGCGCGGGG
CACGACAGCC CGGTCTCCTC CCAGATCGGC GTCACCGTGA CCGTCCTCTA CGACCGGCAG
GGCATCACCC GGCCGGTCAC GACGTACTCC CAGATCGCCG ACCAGCCGGT CGCGGCCAGG
CGGATCGACC TCAGCGCGTC CGCGGCCGCG GTCGACATCG GCTCGATCAC GCCGACGAAC
GGCGCCGAGT CACTGCAGGC CGGGCTGCTC AGCCTCTCCG GTGCGCTGAC CTTCGCGAGC
ACGGCCAACG CCAGCCTGAC GGCGGCGTCC GCCGGGCTCG CGACCGGGGA ACAGGGGGCA
GGCGCCTCGA CGACCGTCGC GGCGCCCTCC GCCGTGGGCA TCCTGCCCGC CGCTGCCGGC
GGGATCGACG GGACCTGCGG GCTCGCGTGC TGGGGCGCCA GCCAGGTCGA CCTCGGCGCC
GTGACCGCGA CCGACGGGCT CCCGAACGTC GGCTCGGCCG CCAACCCGAT GCAGGCCCGG
CTCACCGACC TGACCAACCT GGGACTCTCC TTCGAGAGCG GCGCTGCCGC GGACTACCGG
ACCGGGCTGG GCCTCAGCCG TCCGCTGGTC CGTCTCGACG CCGGCGCCAC GGCCACGAAC
AGCGGGGTCA GCGCGACCTG CGCGCCCTCC GGCACCGGGG CACCGGCCCT GGTCCGGTCC
TCGGGCTTCC TGCGCACGAC CCCGATGACC GACGCCACCC CCACCGCCGA GGCCTGTGCG
GTGAGCTCGG CGAGCACGAT CTCCCTGTTC CCGACCTCGT TCGCTCCCGA CGGAGTGCTC
CAGGTGGAGC TGGTCCGCGC CACCGCCCGC TGCGTGGTCA GCGGCGCCGG CCACGTGGCG
CAGCCGCCGA CGTTCGACTA CCGGGTCGTC GTACGCCGGC ACGTCCCCGG CACCGAGGCC
GCGCCGGCCG GAGGCTACGA CGACGTGCTT GCGATCACCC CCTCGCTCAC CGCCGACGAC
CTGGCAGCGA TCGACCCGGC GTCCTTCGAC GTCGGCGGCG GCCACACCCT GGCCGACTAC
GTCGCGTCCT GGTCGGCGCT GGTGCCGGGC ACCGTCGAGA CGACCGCCGC GAACGGGCTG
TCCGCGGTGA CGCTGTCCGG GGTCCTCAAG CTCACCAGCC AGCCGATGCG GGTGCTGCCC
GACAGCACCG TCGACCCGGC CTCGGCCGTC TCGCTCACCC TCGGCCAGGT CGGCTGCTCG
GCCCTGGACG CGCGATGA
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| Protein sequence | MSRSADRRRD DGFTLIEIIV ALGVIMTVMA AVLPQLLVGI RSGETSRLVT QTKGVAQGQL
ERMRNLPYHV APEAGDYRDV LDYYFRNLTT PGPITCTDPD GLAMPTTAWT GYVPADGARC
SYEPQSGEMY RYVVPHPATG TDPLAGFQVV VDTQFLSAPK SDGSSDVLAP PSGYNTQSAG
HDSPVSSQIG VTVTVLYDRQ GITRPVTTYS QIADQPVAAR RIDLSASAAA VDIGSITPTN
GAESLQAGLL SLSGALTFAS TANASLTAAS AGLATGEQGA GASTTVAAPS AVGILPAAAG
GIDGTCGLAC WGASQVDLGA VTATDGLPNV GSAANPMQAR LTDLTNLGLS FESGAAADYR
TGLGLSRPLV RLDAGATATN SGVSATCAPS GTGAPALVRS SGFLRTTPMT DATPTAEACA
VSSASTISLF PTSFAPDGVL QVELVRATAR CVVSGAGHVA QPPTFDYRVV VRRHVPGTEA
APAGGYDDVL AITPSLTADD LAAIDPASFD VGGGHTLADY VASWSALVPG TVETTAANGL
SAVTLSGVLK LTSQPMRVLP DSTVDPASAV SLTLGQVGCS ALDAR
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