| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1103 |
|---|
| Symbol | |
|---|
| ID | 4599356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1164146 |
|---|
| End bp | 1166326 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639775699 |
|---|
| Product | protein of unknown function DUF1524 RloF |
|---|
| Protein accession | YP_922306 |
|---|
| Protein GI | 119715341 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1479] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.509956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGGCA AGATGGCCAT CGTGGAGACC TTCAAGCGAA CGCCGCTCCA GCTGTTCAAC
CTGCCCCAGC ACTTCGTCAT CCCGCTGTTC CAACGTCCGT ACGTTTGGAA GGAGGACGAG
CAGTGGGAGC CGCTATGGAA GGACATCCGA CGGGTCGCCG AGCTCCGAAT GAATGAGCCG
CACCTGAACC CGCAGCACTT CCTAGGTGCA GTCGTGCTTC AGGCGCACGA CGCCGGCAGT
AACCGGGTCA CCACGTGGAA CGTCATCGAC GGGCAACAGC GGCTGACGAC GCTTCAGGTG
CTCATGGACG CCACCAGCGC GGTTCTCGCC CAGGCCGGCG CCGACCGATA CGCCAGTCAG
CTCGAGTCGC TGACCCACAA CTCGGCGAAC TTCATCCCGG AGGAGGAGAG CGGGCTGAAG
GTCCGGCACC TCAACAACGA CCACGAGGCC TTCGACGAGG TCATGGACGC TGAGTCCCCG
GTGGATTACG CCAGCCTCAA GCACTCCGAG TCCCGGATCG TGAAGGCGCA CCGGTACTTC
ACGACCGCGG TGTCCCAATG GCTCGGCGCC CCGGATGGCG ATGACTTCGG CATCAAGGCC
GAGCAGTTGG CGAGCGTGCT CCAGGCGGAC CTCCAGCTCG TGACGATCGA GCTGCTGTCG
TCGGAGAATT CACAGGAGAT CTTCGAGACG CTGAACGCTC GCGGAACTCC GCTCACCGCT
GCCGATCTCG TTCGCAACTT CGTCTTCCAG CGTCTCGAGG CCGAGGGTGG TGACACCAAG
AAGGCCTACA AGGAGGACTG GCCGTTCGAG ACGAAGTTCT GGACCAGGGA GATCAGCGTC
GGGCGCTATC TCGTGAGCAG GAGCTCGCTG TTCCTCAATC AGTGGCTCAT CGCCAGACTC
GGTGAGGAGA TTGGTCCCCA GTCGACCTTC AGTCGTTTCA AGTCGTACGT CGAGCACGAT
GCCGGCCACA AGATGGCTGA CCTCCTGCCT GTCATCAAGG AGCAGGCGGA ACGGTACGAG
GCCTGGACGG AGGTTGCCGC CAAGCCGAGC GGCAACCTGA GCGTGGTCGA AATGGCTGTC
TACCGCATGC AGGCCAGTGG GGTGGAACTG CTCAAGCCGC TTCTGATCTG GCTGCACGAG
CCAGGCCGGA ACCTTCCGCA AGAGACGATC GAGCGCATCG TCGAGGCGGC CGAGAGCTGG
ATCGTGCGGC GGCAACTCCT GAGGCTGACA GGTTCAGACC TCGGCCGGGT CGTGGCTGAC
ATCATCAAGA GGCACAGCGG CTCGCCGGCC GACGATTTGG CCGATCGGGT CGTCACCTAC
CTGTCTCGCC TCAACGTAGC CAGCACCTAC TGGCCAGGGG ACAACGAGAT CCGTGTCGCG
CTGACGACCG AGTCGGCCTA CCGCCGATTC CCACGTGCCC GGCTGCGCTC CTTCCTGGAG
GCGATCGAGA ACCACTACCG GGCCGAGACC AAGCAGCCAC AGGCTGAGCG TTCTGGCTTC
CCGATCGAGC ACATCCTGCC GCAGAAGTGG CGGGAGAACT GGCCGGTCAG CTCACCCCAA
GAAGAGCAGG AACGTCAGGA ACGTGTCCAC AAGCTGGGCA ATCTGACCCT CCTGACGGGT
CCGCTCAATT CGAAGGTCTC CAACGGTCCT TGGGACACGA AGCGCAGGGC CCTCTTGCAG
CACAACACGA TCAAGCTCAC CGGAAGGCTC CTCGACTGGG TCGGCGACGC CGATTGGTCG
GAAGCACAGA TCGACCAGCG AACAGCAGCG CTCATCGACG TCCTGCTGGA AGTCTGGCCG
GTCCCCGAGG GACACAACGG TCAGGTGGTG GACCCCCAGG CCAAGGCGCA AGACTGGATC
GAGCTGAAGC ATTTGGTCGA TGCGGGCCTG ATTGCACCGG GGGACAAGTT GATCGCCACT
CACCGCGACT TCGCCGGGCG TGAGGCCGAG ATCGGTGACG ACCTCCGCAT CCACTTGGAC
GGCAAGGCCT TCAGCACCCC GTCCGGAGCA GGACAGCACC TTCGCAAGAA GGCGACGAAC
GGCTGGTACT TCTGGGCTCT GGCAGACGGA CGCCGGCTCC GGGACGTTCG GGCGGAGTTC
TTGAGTGCCG CTTCCACCGA CGAGGGACAA CTCGAGCTGA TCGGTGGCGA GCCGGAACCG
GCCCCCGACG TACGGAGTTG A
|
|---|
| Protein sequence | MDGKMAIVET FKRTPLQLFN LPQHFVIPLF QRPYVWKEDE QWEPLWKDIR RVAELRMNEP
HLNPQHFLGA VVLQAHDAGS NRVTTWNVID GQQRLTTLQV LMDATSAVLA QAGADRYASQ
LESLTHNSAN FIPEEESGLK VRHLNNDHEA FDEVMDAESP VDYASLKHSE SRIVKAHRYF
TTAVSQWLGA PDGDDFGIKA EQLASVLQAD LQLVTIELLS SENSQEIFET LNARGTPLTA
ADLVRNFVFQ RLEAEGGDTK KAYKEDWPFE TKFWTREISV GRYLVSRSSL FLNQWLIARL
GEEIGPQSTF SRFKSYVEHD AGHKMADLLP VIKEQAERYE AWTEVAAKPS GNLSVVEMAV
YRMQASGVEL LKPLLIWLHE PGRNLPQETI ERIVEAAESW IVRRQLLRLT GSDLGRVVAD
IIKRHSGSPA DDLADRVVTY LSRLNVASTY WPGDNEIRVA LTTESAYRRF PRARLRSFLE
AIENHYRAET KQPQAERSGF PIEHILPQKW RENWPVSSPQ EEQERQERVH KLGNLTLLTG
PLNSKVSNGP WDTKRRALLQ HNTIKLTGRL LDWVGDADWS EAQIDQRTAA LIDVLLEVWP
VPEGHNGQVV DPQAKAQDWI ELKHLVDAGL IAPGDKLIAT HRDFAGREAE IGDDLRIHLD
GKAFSTPSGA GQHLRKKATN GWYFWALADG RRLRDVRAEF LSAASTDEGQ LELIGGEPEP
APDVRS
|
|---|
| |