| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1102 |
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| Symbol | |
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| ID | 4599355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1161255 |
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| End bp | 1163873 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639775698 |
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| Product | exonuclease V subunit alpha |
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| Protein accession | YP_922305 |
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| Protein GI | 119715340 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACGGCG GCGTGAAGTT CTACAACGGC GCGGCGAAGG CCGCGCGCGC CTACGTCGAG
CGCGACTGTT CGCGTGCCGA TGACTACTAC CTCGGCGAAG GCACCGGCGT CGCCGAGCGG
CTCACCGCGA CCCCGGCTGG CGTCGCGGGA GCTGGCTCGA TGGACGGCGA CGAGTACGAG
CAGTGGGTCG CCGGGATCGA CATCGACACC GGGTGCAAGA AGGGTCGGGT CCGTGAGGAC
GCGAACGCGC TGCGGTTCGT CGAGGTCACC GTCAACGGCC CGAAGACCTG GTCGTTGGCC
GCTGCGCTGC ACCCCGAGGT GTCCGAGGCG CTTGACGGAG CTCAGGATCG TGCTGCGGAA
CAGATCGTGG GGTGGCTCGC GCTGCACGCG ACCACCCGGG TCGGGCCCCG CGGACGGCAA
GTCCAGGTAC CGGTCGAGCG GATCGAGGCG GCGGTGATCC GGCACTACAC GTCGCGGGCA
GGCGACCCGC ACCGGCATCT GCACCTCCAG GTCAACGCTC GCGTGTTCGC AGCCGGCGCC
TGGCGGGGCC TGCACTCGGT GGGTGTGCGC GACATGATCG AGGCGATCAA CGGCATCGGG
CATGCCGCGG TCGCCACCGA CCCGGAGTTC CGGGCGGTCC TCGCCGCACG CGGCTTCACC
CTGGACCCCG AGACCGGGGA GATCGAGCAG CTCGCGCCGT ACGTCGGGGC GTTCAGCGCA
CGGACCAGTC AGATCCACCG CAACATCGAC CGGTACGAAG CTGAGTGGCG ACGCGAGCAT
CCCGGCGAGG AACCGGGGCC GCGGCTGCGT GAGGCCTGGG ACCGGCGGGC GTGGGCCGAT
GCGCGGCCGG ACAAGGTCGT CCCCACGGGC GGCGCTGACC TGGTCGCACG ATGGAACGAC
GAGCTGCGTG CCCTGGGTTA CCGCGACCCA GCCGCCCCTG CCGTGCTGGA GACAACGCAG
GTCGGCCGGA TCGACCGCGA CGGTGCCGCG GAGTGGGTCG TATCCCAGCT CGGGGCGAAG
CGGTCGGCGT GGAACACCGC CGACATCCGC GGCAAGGTCG AGCTCCTGCT GGCCCAGACC
AACCTGGTCA CCACGCCCGC AGCGCGGATC GAGCTCGCCG AGGACGTGAC CGCCCGCGCC
GCCGCACGCT GTGTTCGGCT GCTCGCGACG CCCGACTTGC CCGAGCACGT CCGGTCGCTG
ACCTCCCAGC AGGTGGTGAA CGTCGAGGCT GACGTCGTCG GTCGCCTCGC TCGCCGTGCC
GAGAAGCCCG CCAGGCGGGT CCGTCTTCAA GGTCGCGGAT TGGTGCGGGT CGACCCCACC
CAGGCCGCCG TCGTCGGTGC CCTGGCCGGT GACGGCCAGC TCGTGGTCGT GGAGGGCGCG
GCCGGCGCCG GGAAGACCAC GGCGCTGAGG GCGACTCGGG AGCTGCTGGC AAGACATGGG
CACCGTCTCG TGGTGGTGAC ACCGACCTTG AAGGCCGCCG AGGTCGCCGC CGCAGAGACC
GGCGCGGACG GGCGCTCCGC GGCCTGGCTG ATCCACCAGC ACGGCTGGCG CTGGGACGCC
GACGGGCACT GGGCACGCCG ACCCGACACC ACGCCTGACG CGGCCGCGCG CCTGCGGCCA
GGGGACCTGC TGCTGATCGA CGAGGCGGGG ATGCTGGACC AGGACACCGC CCGCGCGCTC
CTCACGATCG CCGACGAGGC CGGGGCACGG GTCGCCCTCG TCGGCGACCG ACACCAGCTC
CCGGCGGTCG GCCGCGGAGG CGTGCTGGAC CACGCGCTCG CGTGGTCCCA CCCGACCTCG
GTCGTATCGC TGCAGAAGGT GCACCGGTTC ACCGACCCCG ACTACGCCGC ACTCTCCCTG
CGCATGCGCA CCGGCAACCA CCCGGCCGCG GTCTTCGACG CGCTCCACCG CCGCGGATCG
ATCCTGATCC ATCCCAGCGA GGCCGAACGC ACCGCCGCCC TCGCCGAAGC GGGAGCGGCC
GGCGACCTCG TCCTCGCCGA CACCCGCGAG CACGTGGCTA GCCTCAACGC CGCGATCCGC
GACCAACGCC GCGCCGACCC CGCGCGCGAC CCGGCGGAGT CGATGGTGAC CGCTCGCGGC
GAACGGATCG GGGTCGGGGA CAGGGTCGCC ACCCGACGCA ACGACCCCGA CCTCGGAGTC
GCGAACCGGC AGACCTGGAC CGCCATCGGC TTCGGCGAGG ACGGCAGCCT TGTACTCCGC
GGACGGGGAC GCGACCGAGT GGTCCCGACG GAGTACGCGA ACAGGTTCGT CGAGCTCGCC
TACGCCACCA CCGTCCACGG AGCACAAGGC GAGACCGTCG ACCGAGCACA CGTCGCCATC
GGCGACACCA CCGGCGCCGC CGCAGCCTAC GTCGCAATGA CCAGAGGCCG ACTCGACAAC
ACCGCGCACC TGGTGGCCGA GTCCGTTGAG GACGCCCGCA AGCTGTGGGT CGAGGTCTTC
GGCCGGGACC GCGCCGACCT CGGCCCGGCC CACGCGAAGC GGCAGGCGAT CGAGGCGGTC
GATCGCTACG GCACCCAGAA GCGTCGCCTG TCACGGCAGG AGACGGTGGA GGAACCGCGT
CGACCGGCCC CGGCATCCGG CGGCGGGATC GGCATCTGA
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| Protein sequence | MHGGVKFYNG AAKAARAYVE RDCSRADDYY LGEGTGVAER LTATPAGVAG AGSMDGDEYE
QWVAGIDIDT GCKKGRVRED ANALRFVEVT VNGPKTWSLA AALHPEVSEA LDGAQDRAAE
QIVGWLALHA TTRVGPRGRQ VQVPVERIEA AVIRHYTSRA GDPHRHLHLQ VNARVFAAGA
WRGLHSVGVR DMIEAINGIG HAAVATDPEF RAVLAARGFT LDPETGEIEQ LAPYVGAFSA
RTSQIHRNID RYEAEWRREH PGEEPGPRLR EAWDRRAWAD ARPDKVVPTG GADLVARWND
ELRALGYRDP AAPAVLETTQ VGRIDRDGAA EWVVSQLGAK RSAWNTADIR GKVELLLAQT
NLVTTPAARI ELAEDVTARA AARCVRLLAT PDLPEHVRSL TSQQVVNVEA DVVGRLARRA
EKPARRVRLQ GRGLVRVDPT QAAVVGALAG DGQLVVVEGA AGAGKTTALR ATRELLARHG
HRLVVVTPTL KAAEVAAAET GADGRSAAWL IHQHGWRWDA DGHWARRPDT TPDAAARLRP
GDLLLIDEAG MLDQDTARAL LTIADEAGAR VALVGDRHQL PAVGRGGVLD HALAWSHPTS
VVSLQKVHRF TDPDYAALSL RMRTGNHPAA VFDALHRRGS ILIHPSEAER TAALAEAGAA
GDLVLADTRE HVASLNAAIR DQRRADPARD PAESMVTARG ERIGVGDRVA TRRNDPDLGV
ANRQTWTAIG FGEDGSLVLR GRGRDRVVPT EYANRFVELA YATTVHGAQG ETVDRAHVAI
GDTTGAAAAY VAMTRGRLDN TAHLVAESVE DARKLWVEVF GRDRADLGPA HAKRQAIEAV
DRYGTQKRRL SRQETVEEPR RPAPASGGGI GI
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