| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1090 |
|---|
| Symbol | |
|---|
| ID | 4599570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1150783 |
|---|
| End bp | 1152180 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639775687 |
|---|
| Product | recombinase |
|---|
| Protein accession | YP_922294 |
|---|
| Protein GI | 119715329 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC GCTGCGCCCT CTACCTGCGC GTGAGCCTCG ACCGCACCGG TGACCACCTC
GCCGTCGACC GCCAGCGCGA GGACTGTCTC GAAATTGCCC GCCTGCGGGG GTGGACCGTG
GTCGGCGAGT ACGTCGACAA CAGCATCAGC GCGAGCAACG CGGCCAAGGT ACGGCCCGGC
TACGAGCGCC TCGTGAGCGA CTTCGATGCT GGCGCCTTCG ACGCTCTTGT GTGCTGGGAC
CTCGACCGCC TAACGCGCCA GCCTCGCCAG TTGGAAGATT GGATCGACGC CGCGGAGGAG
CGCGGGCTGC GACTCGTCAC GGCCAATGGC GAAGCTGACC TCGGCACCGA CGGAGGCCGC
ATGTTTGCGC GGGTCAAGGC AGCCGTGGCC AGATCGGAGG TCGAGCGCAA GTCGGCCCGC
CAGACACGAG CGCTGCGTCA GCGCGCCGAG CGAGGACGCC TGCCCGCGGG CGTTCGGCTC
ACCGGTTACG CGACCGACGG CACCGTTGAT GAGGTCGAGG CGAGCGTCGT GCGCGAGATG
TTCGAGCGCT TCCTCGTGGG CGACTCATTG AAGGCCATCG CAGCCGATCT TGAGCGCCGC
GGGATCGTGA CCCGGTCGGG GCGCCCGTGG AACCCGAGCA GCGTCCGCAC GGTGCTGCTC
AACCCTCGAT ACGCGGGTCT GTCGGTGTAC AAGGGCGCGC CGGTCGTGAA GGACGGCGAG
CGCGTTCCCG GCGCGTGGGA GCCGATCGTC ACCGAGGCGA CGTATGACGC CGTGCGCGCG
CGACTCGCCG ACCCTGCACG TAAGTCAAAC CGCAAGGGCA CCCATCGTCG CCACCTCGGG
TCGGGCCTGT TTCTCTGCGG CGAGTGCGAC AAGCCAATGC GCACCCACAA CTCCCGGTAC
CGCTGCCCCG ACGCCCACCT GATGCGCTCC CGCGGGCAGG TCGATGACTT CGTGCTGCGA
GTAGTCCGTG CTCGGCTTGC CCGCCCTGAC TTGCGTGACC TGCTCGCCTC ATCCAACGAC
GACGAGAGTG CGTCTCTCAC TGCCGAGATC GAGGACCAGC GCCGCCGTCT CGCAGCGATT
GAGCACGACT ACGACGAGGG CCACATCGAC GGGCGCCGCT ACGCCGAGGC GTCGGGCAAG
GCCCGCGCCC GACTCGACGC CGCGCAGGCC CGCCGGACGG CCCTGACGGC AGGCTCTGCC
GCCTCTGGCA TCCTCGATGC CCCTGACCCG GTCGCCGCCT TCGACAGTGC CTCGTTAGGG
GCACGGCGCA CCGTCATCGA CGCCCTACTC TCGGTCCGCC TCATGCGTGC CCCCGTCGGA
AGTAGGACGT TCAACCCAGA CTCCGTCCAC ATCGAGTGGC GAGCGCCGAG CGCACCCAGC
ACTTCGACGC CCGCGTGA
|
|---|
| Protein sequence | MTTRCALYLR VSLDRTGDHL AVDRQREDCL EIARLRGWTV VGEYVDNSIS ASNAAKVRPG
YERLVSDFDA GAFDALVCWD LDRLTRQPRQ LEDWIDAAEE RGLRLVTANG EADLGTDGGR
MFARVKAAVA RSEVERKSAR QTRALRQRAE RGRLPAGVRL TGYATDGTVD EVEASVVREM
FERFLVGDSL KAIAADLERR GIVTRSGRPW NPSSVRTVLL NPRYAGLSVY KGAPVVKDGE
RVPGAWEPIV TEATYDAVRA RLADPARKSN RKGTHRRHLG SGLFLCGECD KPMRTHNSRY
RCPDAHLMRS RGQVDDFVLR VVRARLARPD LRDLLASSND DESASLTAEI EDQRRRLAAI
EHDYDEGHID GRRYAEASGK ARARLDAAQA RRTALTAGSA ASGILDAPDP VAAFDSASLG
ARRTVIDALL SVRLMRAPVG SRTFNPDSVH IEWRAPSAPS TSTPA
|
|---|
| |