Gene Noca_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1078 
Symbol 
ID4599558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1136431 
End bp1137555 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content74% 
IMG OID639775675 
Producthypothetical protein 
Protein accessionYP_922282 
Protein GI119715317 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGC GTTCCCCGGG CGATGTCGGC GGTGGCCTCC ATGCTGGCTC CATGACCGCG 
GTGACCCTCT TCCTCGCCCT CCTCGTCGGG CTGGCGCTCG GCTGCCTCCT CGGTGCCCTG
CTCGGCGTGC TGTGGTCCCG TTCCCGGCGC TCGTTCACCG ACGGCCTGGT CGACCAGGCC
GAGGTCATGC AGGGCCTGGA CCGGCTCAGC GACCAGATGC ACCACCTCGA TCGGGCCCGC
GCCACCTGGC AGGGTCACTT CGACACCCAG GTCGACCAGC TCCAGCGCGA GACCCGGTCG
CTCTCGACCG CCCTGCGCAA GCCGCAGGTC CGCGGCCGGT GGGGCGAGCT GCACCTGCGT
CGGGCCGTCG AGCTGGCCGG GCTCGTCGAC CGGTGCGACT TCAGCGAGCA GGTGCGCCTC
GACGACGGGG CGCGCCGGCC GGACCTGGTG GTACACCTCG TCGGCGGGCG ACGGGTGGTC
GTCGACGCCA AGGTGCCGCT GGACGCCTAT CTCGACGCGA CCTCCACCGA CGACGAGGAG
GAGCACCGCG CCCACCTGCG CCGCCACGTC ACCCAGCTGC GCACCCACGT CGAGGCGCTC
GGCTCCAAGC AGTACTGGCG CTCGCTCGAG GAGAGCCCGG AGTTCGTGGT GCTGTTCGTG
CCGGCCGAGT CGTTCCTGGC CGCGGCCCTG GAGACCGACC CGACCCTGAT CGAGCACGCC
GCCGCGCGCC AGGTCGTGCT CGCCACCCCG ACGACGCTGA TCGCGCTGCT GCGCACGGTC
GCCCACGGCT GGAGCCACGA GGCCCTCGCC GACCAGGCGC GCGAGATCCA CCGCCTCGGG
CGCGAGCTGC ACGGCCGGCT GCTCGGCATG ACCGGCCACC TCGACCAGCT CGGCCGCTCG
CTCAACGCCG CGGTCGGCCA CTACAACCAG ACGGTCGGCT CCCTGGAGTC GCGGGTGCTG
GTCAGCGGCC GCCGGTTCGC GGACCTCTCG GTGACCGACG AGGAGCTGCC GAGCCCGCGC
CAGATCGACG CCACGGCCCG GTCCATATCA CCCTCCGGGC TGCGCTCGGT GGAACGGCGC
GCCGCCGACG ACGATCCGGG CGCGGACCAT ACCGTGGCCC TGTGA
 
Protein sequence
MAARSPGDVG GGLHAGSMTA VTLFLALLVG LALGCLLGAL LGVLWSRSRR SFTDGLVDQA 
EVMQGLDRLS DQMHHLDRAR ATWQGHFDTQ VDQLQRETRS LSTALRKPQV RGRWGELHLR
RAVELAGLVD RCDFSEQVRL DDGARRPDLV VHLVGGRRVV VDAKVPLDAY LDATSTDDEE
EHRAHLRRHV TQLRTHVEAL GSKQYWRSLE ESPEFVVLFV PAESFLAAAL ETDPTLIEHA
AARQVVLATP TTLIALLRTV AHGWSHEALA DQAREIHRLG RELHGRLLGM TGHLDQLGRS
LNAAVGHYNQ TVGSLESRVL VSGRRFADLS VTDEELPSPR QIDATARSIS PSGLRSVERR
AADDDPGADH TVAL