Gene Noca_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1076 
Symbol 
ID4599556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1135392 
End bp1136018 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID639775674 
Producttranslation factor SUA5 
Protein accessionYP_922281 
Protein GI119715316 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCT ACGTCGACGT ACACCCCGAG AACCCCCAGT CCCGCCTGCT CGACCAGATC 
GCCGACGCGC TGCGCGAGGA CCAGCTGATC GCCTACCCGA CCGACTCGGG CTACGCGCTC 
GGCTGCCGGC TCGGCAACCG CGAGGGTCGG GACCGGATCC TGCGGATCCG CCGGCTCGAC 
GAGAAGCACC ACTTCACGCT GATGTGCAAG GACTTCGCCC AGCTCGGGCA CTTCGTGAAG 
TTGGACAACT CCGCGTTCCG CTCGATCAAG GCCGCGACCC CGGGGCCGTA CACGTTCATC 
CTGCCGGCGA CCCAGGAGGT CCCCCGCCGG CTGATGCACC CCAAGAAGCG CACCGTGGGC 
GTCCGGATCC CGGCGCACGT CTTCGACCAG GCCCTCCTGG GGACCCTCGG TGAGGCGCTG 
TTGACCAGCA CCCTGATCCT GCCGGGGGAG ACCGAGCCGC GCAGCCTCGG CTGGGAGATC 
AAGGAGGAGC TCGACCACCA GGTCGACGTG GTGGTCGAGG CGGGCGAGAC GCTGGCCGAG 
CCGACCACCG TCATCGACTG GTCGGAGGGC TACCCCGAGG TGCTGCGGGT CGGCGCCGGC 
GACCCGGCCC GCTTCGAGGC CGCCTGA
 
Protein sequence
MARYVDVHPE NPQSRLLDQI ADALREDQLI AYPTDSGYAL GCRLGNREGR DRILRIRRLD 
EKHHFTLMCK DFAQLGHFVK LDNSAFRSIK AATPGPYTFI LPATQEVPRR LMHPKKRTVG 
VRIPAHVFDQ ALLGTLGEAL LTSTLILPGE TEPRSLGWEI KEELDHQVDV VVEAGETLAE 
PTTVIDWSEG YPEVLRVGAG DPARFEAA