Gene Noca_1061 details

Gene Information

• Locus tag: Noca_1061
• ID: 4599667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 1119973
• End bp: 1121688
• Gene Length: 1716 bp
• Protein Length: 571 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639775659
• Product: fumarase
• Protein accession: YP_922266
• Protein GI: 119715301
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
• TIGRFAM ID: [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGCAAG ATCCCGAGTT CCTCTACTCC GACCTCCTGC CGACCGGCCC CGACGAGACG 
CCGTACCGCC TGGTCACCAC CGAGGGCGTC TCGACGTTCG AGGCGAACGG GCGCACCTTC 
CTCGAGGTGT CGCCGGAGGC CATCCAGCGG CTCACCGCCG AGGCGATGCA CGACATCGCG 
CACTACCTGC GGCCCGCCCA CCTGGCCCAG CTGCGCCGGA TCATCGACGA CCCGGAGGCG 
TCCGGAAACG ACCGGTTCGT GGCGCTCGAC CTGCTCAAGA ACGTCAACAT CTCCGCCGGC 
GGCGTGCTGC CGATGTGCCA GGACACCGGC ACCGCGATCG TGATGGGCAA GAAGTCCGAG 
GGCGTGCTGA CCGGCAGCGA CGACGGCGAG GCGATCTCGC GCGGCGTCTA CGACGCGTAC 
ACCAAGCTCA ACCTGCGCTA CTCCCAGCTG GCGCCGCTGA CGACCTACGA GGAGAAGAAC 
ACCGGCACGA ACCTGCCGGC CCAGATCGAG ATCTACTCGA CGGCCTCCCA CGGGCCCGAT 
GGGATCTCTC GGCCGGAGTA CAAGTTCCTG TTCATGGCCA AGGGCGGGGG CTCGGCGAAC 
AAGTCGTTCC TGTTCCAGGA GACCAAGGCC GTCCTCAACC CGCAGCGGCT GCTGAGCTTC 
CTCGACGAGA AGATCCGCTC GCTCGGGACG GCCGCGTGCC CGCCGTACCA CCTCGCGATC 
GTGATCGGCG GCACCTCGGC GGAGTTCGCG CTCAAGACCG CGAAGTACGC CTCCGCGCAC 
TACCTCGACA ACCTGCCGAC CTCGGGCTCG ATGTCGGCGC ACGGCTTCCG CGACCTCGAG 
CTCGAGGAGC AGGTCTTCGA GCTCACCCAG TCGTTCGGGA TCGGCGCGCA GTTCGGCGGG 
AAGTACTTCT GCCACGACGT GCGGGTCGTG CGGCTGCCGC GGCACGGCGC GTCCTGCCCG 
GTCGCGATCG CGGTGTCCTG CTCGGCCGAC CGGCAGGCGC TGGGCAAGAT CACCACCGAG 
GGCGTCTTCC TCGAGCAGCT CGAGACCGAT CCGGCGCAGT ACATGCCCGA CGCGGGCGTG 
GCCGAGGACA TCTCCGGCGG CGAGGTGGTC GCGATCGACC TGACCCGGCC GATGCCGGAG 
ATCCTGGGCG AGCTGCGCAA GCACCCGGTC AAGACCCGGC TCTCGCTGAC CGGCCCGCTG 
GTCGTCGCCC GCGACATCGC GCACGCGAAG ATCAAGGAGC GGCTCGACGC CGGCGAGGAG 
ATGCCGGCGT ACCTCCACGA CCACCCCGTC TACTACGCCG GGCCCGCGAA GACCCCCGAG 
GGCATGGCGT CCGGCTCGTT CGGGCCGACC ACTGCCGGCC GGATGGACTC CTACGTCGAG 
CAGTTCCAGG CCGCTGGCGG CTCGATGGTC ATGCTCGCCA AGGGCAACCG GTCGAAGACC 
GTCACCGAGG CGTGCGCCGC GCACGGCGGG TTCTACCTCG GCTCGATCGG CGGGCCGGCC 
GCGCGGCTCG CGCAGGACTG CATCAAGAGC CAGGAGGTGC TGGAGTACCC CGAGCTCGGC 
ATGGAGGCCA TCTGGAAGAT CGAGGTCGAG GACTTCCCGG CGTTCATCGT GGTCGACGAC 
CAGGGCAACG ACTTCTTCAC CGACCCCTCC GGCGCCGTCA CCGTGCCGCT CAGCTCGATC 
GGCGCCGCCG GGATCCGGGT GCGCTCCGCG GAGTAG 

 

Protein sequence

MAQDPEFLYS DLLPTGPDET PYRLVTTEGV STFEANGRTF LEVSPEAIQR LTAEAMHDIA 
HYLRPAHLAQ LRRIIDDPEA SGNDRFVALD LLKNVNISAG GVLPMCQDTG TAIVMGKKSE 
GVLTGSDDGE AISRGVYDAY TKLNLRYSQL APLTTYEEKN TGTNLPAQIE IYSTASHGPD 
GISRPEYKFL FMAKGGGSAN KSFLFQETKA VLNPQRLLSF LDEKIRSLGT AACPPYHLAI 
VIGGTSAEFA LKTAKYASAH YLDNLPTSGS MSAHGFRDLE LEEQVFELTQ SFGIGAQFGG 
KYFCHDVRVV RLPRHGASCP VAIAVSCSAD RQALGKITTE GVFLEQLETD PAQYMPDAGV 
AEDISGGEVV AIDLTRPMPE ILGELRKHPV KTRLSLTGPL VVARDIAHAK IKERLDAGEE 
MPAYLHDHPV YYAGPAKTPE GMASGSFGPT TAGRMDSYVE QFQAAGGSMV MLAKGNRSKT 
VTEACAAHGG FYLGSIGGPA ARLAQDCIKS QEVLEYPELG MEAIWKIEVE DFPAFIVVDD 
QGNDFFTDPS GAVTVPLSSI GAAGIRVRSA E