Gene Noca_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1060 
Symbol 
ID4599666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp1119060 
End bp1119743 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID639775658 
Producthypothetical protein 
Protein accessionYP_922265 
Protein GI119715300 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTACG TCGAGATCGC GCGCGCGGAG ACCGCGCGCG GCGAGCTGGT CCTGCGCGAG 
CGCCGCGCGG ACAACGCGCC GACCTCCCTG GAGCTGCGCG CCAACGGCGT GTTCGTCATG 
GACACCCTCG AGGTCGGCTC CGAGCAGGCG CTCGCGGAGG CCGCGCTCGC CCAGGTCCAG 
CAGCCGCGGG CGGTCGTGGT CGCCGGCCTC GGCCTCGGGT TCACCATGCA CGCGGTGCTC 
GCCGATCAAC GGGTGGAGAA GGTCGCCGTC GTCGAGATCG AGCAGGCGCT GGTCGACTGG 
ATGCGGGCCG GCACGATCCC GCACGGCCCG GGGCTGCTCG CGGACGAGCG GGTCACGGTG 
GTCGTCGCCG ACATCGGCGA GGCGATGGCC GAGGCCCGGC CGGCGTCGTA CGACCTGATC 
CTCCTCGACG TCGACAACGG GCCGGGCTAC CTGGTGCACG ACGTCAACGC GGCGCTCTAC 
GAGCAGCCGT TCCTCGAGGC CGCCGCCCGC GCGCTGCGGC CCGGCGGCGC CCTGGCGATC 
TGGTCGGCGG CCGAGGCTCC GGTCCTCGGC CGGACGATGG ACTCGGTGTT CGGCAACGTC 
GAGGCGACGC CGTACGAGGT GCTGCTGCAG GACCGCGACG AGCAGTACTG GCTCTACGCG 
GCGCGGGTAA CGTCCGACGC ATGA
 
Protein sequence
MEYVEIARAE TARGELVLRE RRADNAPTSL ELRANGVFVM DTLEVGSEQA LAEAALAQVQ 
QPRAVVVAGL GLGFTMHAVL ADQRVEKVAV VEIEQALVDW MRAGTIPHGP GLLADERVTV 
VVADIGEAMA EARPASYDLI LLDVDNGPGY LVHDVNAALY EQPFLEAAAR ALRPGGALAI 
WSAAEAPVLG RTMDSVFGNV EATPYEVLLQ DRDEQYWLYA ARVTSDA