| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1055 |
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| Symbol | |
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| ID | 4599661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1113257 |
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| End bp | 1114021 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639775653 |
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| Product | Hly-III family protein |
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| Protein accession | YP_922260 |
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| Protein GI | 119715295 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGC CGATGGAGCG GGCAGTGGAC CGGGCCATGG ACCGGGCCCT GACCGGCGCG
GACGCCGTGC GCGCAGGCCT CGACCACCTG CACGAGGCCG TAGCCGACCT CAAGCCGCGG
CTGCGTGGCT GGCTGCACCT CGGCATCGCG CCGCTGACGC TCGCCGCGGG CATCGTCCTC
GTCGCGCTGG CCCCCACGAC CCCGAGCCGG GTCGCGGCGG CGCTGTTCAC CGGCTCCGCG
CTGGTGCTCT TCACGGTCTC GGCGATCTAC CACACCGGCA CCTGGTCGCC CCGGGTGTGG
GCGTTCCTGC GGCGCTTCGA CCACGCCAAC ATCTTCTTGC TGATCGCGGG CTCCTACACG
CCGTTCAGCG TGCTGCTCCT GGAGGGCACG GCGCGGGTCG CGCTGCTGGC CACGGTCTGG
AGCGGTGCGG TGCTCGGCGT GCTGTTCCGG GTGTTCTGGA CCGACGCACC GCGCTGGCTC
TACGTGCCGA TCTACATCGC CCTCGGCTGG GCCGCGGTCT TCTTCATCCC GGCGTTCCTC
GACGGCGCGA CCCGGCTGGG CGGCCTCGGC GTCGGCGTCG CGACGTTCGT GATGATCGTC
GTCGGCGGCG CCCTGTACAC CGTGGGCGGC GTCGTGTACG GCTTCAAGCG GCCCAACCCG
TGGCCGCGCT GGTTCGGCTT CCACGAGGTG TTCCACACCT TCACGATCCT GGCCTTCGTC
AGCCACTACG TGGGTGTGTC GCTCGCAACG TACAGCCTGC GCTGA
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| Protein sequence | MNQPMERAVD RAMDRALTGA DAVRAGLDHL HEAVADLKPR LRGWLHLGIA PLTLAAGIVL
VALAPTTPSR VAAALFTGSA LVLFTVSAIY HTGTWSPRVW AFLRRFDHAN IFLLIAGSYT
PFSVLLLEGT ARVALLATVW SGAVLGVLFR VFWTDAPRWL YVPIYIALGW AAVFFIPAFL
DGATRLGGLG VGVATFVMIV VGGALYTVGG VVYGFKRPNP WPRWFGFHEV FHTFTILAFV
SHYVGVSLAT YSLR
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