Gene Noca_1052 details

Gene Information

• Locus tag: Noca_1052
• ID: 4599658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1108659
• End bp: 1110617
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 639775650
• Product: hypothetical protein
• Protein accession: YP_922257
• Protein GI: 119715292
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1331] Highly conserved protein containing a thioredoxin domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAATC GTCTGGCAAC CGCGACGAGC CCATACCTGC TCCAACACGC TCAGAATCCG 
GTGGATTGGT GGGAGTGGGG GCCGGAGGCG TTCGAGGAGG CCCGTCGGCG CGGCGTCCCG 
GTCCTGCTCA GCGTCGGCTA CGCCGCGTGC CACTGGTGCC ACGTGATGGC GCACGAGTCC 
TTCGAGGACG AGGCGACCGC GGCGTACCTC AACGAGCACT TCGTGAGCGT CAAGGTGGAC 
CGCGAGGAGC GGCCCGACGT GGATGCGGTC TACATGCAGG CGACCACGTC GATGACCGGG 
CACGGCGGCT GGCCGATGAC GGTGGTGCTG GACCACGAGG GCAGCCCGTT CTTCGCCGGC 
ACCTACTTCC CGGACCGGCC GCGGCACGGG CAGCCCGCGT TCCGCCAGGT GCTGGAGGCG 
CTGGCCGACG CGTGGCAGAA CCGATCCGAC GAGGTGCGCC GGGTGGCGGC GAACCTGCGC 
GAGCACCTGT CGTCCACCAG CCTGGCCACG GCGGGCGCGC CGATCACGCG GGCGGTCCTC 
GACGGCGCGG TGCGCACGCT CGCGCTGGAG TACGACGCGG ACGCGGCGGG GTTCGGCGGC 
GCGCCGAAGT TCCCGCCGTC GATGGTGCTC GAGTTCCTCC GGCGGCACGG CGAGCGCGAG 
ATGCTCGGCG CGACCCTGGA GGCGATGGCC CGCGGCGGCA TCCACGACCA GCTCGGCGGC 
GGCTTCGCGC GCTACAGCGT CGACACGGAC TGGGTGGTGC CGCACTTCGA GAAGATGCTC 
TACGACAACG CCCTGCTGCT GCGGGTGTAC GCCGAGTGGG ACACCCCGGT CGGGGTCTGG 
GCCGCCGAGG GGATCGCCGA CTTCCTGCTC GGCGAGCTCC GCACGCCGGA GGGCGGCTTC 
GCCTCGGCGC TCGACGCCGA CTCCGAGGGC GCCGAGGGCA CCTACTACGT CTGGACCCCC 
GCTCAGCTGA CCGAGGTGCT GGGGCCCGAG GACGGTCCGT GGGCGGCCCG GCTGCTCGGC 
GTGACCGACG CCGGCACCTT CGAGCACGGC ACCTCGACCC TCCAGCTGCG GCAGGACCCC 
GACGACCTCG ACCGCTGGTT CGACTGCCAG CGCCGGCTGC GCGAGGCGCG GTCGCACCGC 
GAGCGACCGG CTCGCGACGA CAAGGTCGTG GCTGCCTGGA ATGGCCTGGC GATCAGCGGC 
CTGTGCCGGG CCGGCGCCCT GATCGGACTC CCGGAGTACG TCGCCGCGGC GACCGCCGCG 
GGCCAGCTCC TCTGGCGGGT CCACCTGGTC GACGGCCGGC TGCGGCGGGT CTCCCGCGAC 
GGCGTGGTCG GCGCGCCCGC CGGCGTGCTG GAGGACAACG GCTGCGTCGC GGCCGGCTTC 
CTCGACCTGC TCCAGGCCAC CGGCGACGCC GTGTGGCTGG AGCGCGCGGG CGCCATCCTG 
GAGCTCGCGC TCACCCACTT CGCCGCCGAG GACGGCGGCT TCTTCGACAC CGCCGACGAC 
GCGGAGGCCC TGGTCGCCCG GCCGCGCGAC CCCTCCGACA ACGCCAGCCC CTCGGGCCTC 
GCCTCGATGG TGCACGCGCT GTCGACGTAC GCCGCGCTCA CCGGCTCGGG CCGCCACCGC 
GACGCGGCCG AGGCGGCGCT GGCCTCGGTC GCCACCCTCG CGGAGCGGGC GCCCCGCTTC 
GCCGGCTGGT CGCTCGCCGC CGCCGAGTCG ATGCTCGACG GGCCGGTGGA GATCGCGATC 
GTCGGCGACT GGTCCGAGCA GCGCGACCAG CTCGAGGCAC GGGCCCGGCG GGAGCCCGGG 
GCCGTCGTCG TGGTCGCGGA CCGGGCCGAC GAGGCGATCC CGCTGTTGGC CGGGCGCACG 
CCGGTGGACG GTCGCGCGGC GGCGTACGTG TGCCGCCACC TGGTGTGTGA GCGCCCGGTC 
AGCACCGTCG AGGAGCTGGA CGAGGCCCTG TCCCGCTGA 

 

Protein sequence

MVNRLATATS PYLLQHAQNP VDWWEWGPEA FEEARRRGVP VLLSVGYAAC HWCHVMAHES 
FEDEATAAYL NEHFVSVKVD REERPDVDAV YMQATTSMTG HGGWPMTVVL DHEGSPFFAG 
TYFPDRPRHG QPAFRQVLEA LADAWQNRSD EVRRVAANLR EHLSSTSLAT AGAPITRAVL 
DGAVRTLALE YDADAAGFGG APKFPPSMVL EFLRRHGERE MLGATLEAMA RGGIHDQLGG 
GFARYSVDTD WVVPHFEKML YDNALLLRVY AEWDTPVGVW AAEGIADFLL GELRTPEGGF 
ASALDADSEG AEGTYYVWTP AQLTEVLGPE DGPWAARLLG VTDAGTFEHG TSTLQLRQDP 
DDLDRWFDCQ RRLREARSHR ERPARDDKVV AAWNGLAISG LCRAGALIGL PEYVAAATAA 
GQLLWRVHLV DGRLRRVSRD GVVGAPAGVL EDNGCVAAGF LDLLQATGDA VWLERAGAIL 
ELALTHFAAE DGGFFDTADD AEALVARPRD PSDNASPSGL ASMVHALSTY AALTGSGRHR 
DAAEAALASV ATLAERAPRF AGWSLAAAES MLDGPVEIAI VGDWSEQRDQ LEARARREPG 
AVVVVADRAD EAIPLLAGRT PVDGRAAAYV CRHLVCERPV STVEELDEAL SR