| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1039 |
|---|
| Symbol | |
|---|
| ID | 4599700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1095685 |
|---|
| End bp | 1097034 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639775638 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_922245 |
|---|
| Protein GI | 119715280 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2232] Predicted ATP-dependent carboligase related to biotin carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.71771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC GGGCGGCGGT CCTCAAGAAG GTGACCGAGG AGCTCGGGGA CCGCACACTC
GTGTGGTCAG GGATCCGTGG GGACGACATC GAGCCACTAC GCGACGTACC GCAACTTGGG
TACTCGTTCT CGATCGCCGG GGCGTACAAC GGTCGCTCTG ACGTTCGTGG TCTGGCCTAC
GAACAGCTCA CTCGAGTACG TGTCGATCCG GAGGTTTGGG ACATCGACTT CCACCACCAT
GAAAGAGCTA CGGAGGAGTT CCGGCGGGGA CTTCTCCGAT CCATGAGCGA GCCAAGCGCA
CTCCTTCCGT ACCGTCCGTC AAGCTTCCTC TCGGCGATCC ACTTCGCTCG CCAGGAACGC
TGCGTGAACC TCGGCCTGTT TGGCGCGCAC CAATCCGCCT TCGAGCACAA GCCCTTCGTC
GAGTCAGAAG TCGCCCAACT GGGAATCCCG CACATCCCGT GGACCTATAT CGCCGACGAG
GAACAGCCCC TCGCGCGCAA CCTCGTTTCC GCCGGTCCTC TTGTCCTGCG CCGCAGTCGC
ACGTCGGGTG GTGAAGGCAT CGTGCGCGTC GACTCAGCCG CTGAGATTGG ACCACACTGG
CCGAAGGGCA CCGAGGAGTT CGTGAGCGTG GCGCCCTTCA TAGCCGACAC AATTCCCGTG
AATGTCGGTG CCACTGTTTG GCGGGACTCT CGAGGCGACG ATTGCGTGAC GGTGCACCAC
CCGTCGGTCC AGCTCATCGG CATCAAGTCA TGTGTGACCC GCGAGTTCGG CTATTGCGGC
AATGACTTCG GTGCGGCGCG CGACCTCGAC CGGTCCACTA TCGATCGGAT CGAGCAGTCC
ACCAAGCGCG TCGGGCGCTG GTTGCGCGGG AACGGTTACA TCGGCACGTT TGGCGTCGAC
TACCTGATCA AGGATGGAGT GCCCCTGTTC ACCGAGATCA ACGCGAGATT TCAAGGCTCT
ACATACTCGT CGTGTCGACT CTCGATCGAG CAGGGGGAAG CCTGTCTGAT GCTTGAGCAC
GTCGCCGCCT GGTTGGGCCT ACCCATGCCG GAATCACCGA GCTTGTACGA GCGCACACGA
GCAGTGCGGG ATCTCGCGAA CCTAGCGGTG CACTGGACCG GCCGAGAGGC CGCAACGGTC
AACGCAACCG CTCTCTTCAG TGTGGTGATG GATGACTTCG ATCCCAAAGC GACCAGCGAC
AGCGTTGTGG CAACGGACGT CGCCAACGAG CCAGGCTCCC TGGTCGGCCG TTTCAACGTT
GGAAGGCGGG TGACCGATAC CGGCTACGAT CTTGCCCCTG AACTAGACCG ACTGATTGAC
CGCTGGCGGC GCTCGGAGGA GGCATCTTGA
|
|---|
| Protein sequence | MTERAAVLKK VTEELGDRTL VWSGIRGDDI EPLRDVPQLG YSFSIAGAYN GRSDVRGLAY
EQLTRVRVDP EVWDIDFHHH ERATEEFRRG LLRSMSEPSA LLPYRPSSFL SAIHFARQER
CVNLGLFGAH QSAFEHKPFV ESEVAQLGIP HIPWTYIADE EQPLARNLVS AGPLVLRRSR
TSGGEGIVRV DSAAEIGPHW PKGTEEFVSV APFIADTIPV NVGATVWRDS RGDDCVTVHH
PSVQLIGIKS CVTREFGYCG NDFGAARDLD RSTIDRIEQS TKRVGRWLRG NGYIGTFGVD
YLIKDGVPLF TEINARFQGS TYSSCRLSIE QGEACLMLEH VAAWLGLPMP ESPSLYERTR
AVRDLANLAV HWTGREAATV NATALFSVVM DDFDPKATSD SVVATDVANE PGSLVGRFNV
GRRVTDTGYD LAPELDRLID RWRRSEEAS
|
|---|
| |