Gene Noca_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1015 
Symbol 
ID4599676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1067155 
End bp1067805 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID639775614 
Productbutyryl-CoA:acetate CoA transferase 
Protein accessionYP_922221 
Protein GI119715256 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0247784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCG GGCAGGCACT GACCCGGGAC GACATGGCGG CGCTGGTCGC GCGCGACATC 
CCGCCCGGCT CTTACGTCAA TCTCGGCATC GGCCTGCCCA CGCTGGTCGC CGACCACCTG 
GCACCCGATT CGGGCGTGGT CCTCCACACG GAGAACGGGA TGCTCAACAT GGGCCCGGCG 
GCGACCGGCG ACGAGGTCGA CCTCGACCTC ACCAACGCCG GCAAGGTCCC GGTCACCGAG 
CTGGCCGGGG CGTCGTACTT CCACCAGGCC GACTCGTTCG CGATGATGCG CGGCGGGCAC 
CTCGACGTGT GCGTGCTCGG TGCCTTCCAG GTCTCCGCGG CCGGCGACCT CGCCAACTGG 
CACACCGGCG CTCCGGACGC GATCCCTGCG GTCGGTGGCG CGATGGACCT GGCGACCGGC 
GCCAGGAGCG TGTTCGTGAT GATGACGCTG TTCGCGAAGG ACGGCTCGCC GAAGCTGGTT 
CCGCAGTGCA CCTACCCGCT GACCGGCGTC GGCTGCGTCA ACCGGGTCTA CACCGACGTC 
GCCACCTTCG AGATCACGCC CGACGGCGTC CGGGTGTGCG AGACGTTCGA GACCTCGTAC 
GACGAGCTGG CCGACCGTCT CGACCTGACG CTGCTCCCGC CGCAGGGCTG A
 
Protein sequence
MSGGQALTRD DMAALVARDI PPGSYVNLGI GLPTLVADHL APDSGVVLHT ENGMLNMGPA 
ATGDEVDLDL TNAGKVPVTE LAGASYFHQA DSFAMMRGGH LDVCVLGAFQ VSAAGDLANW 
HTGAPDAIPA VGGAMDLATG ARSVFVMMTL FAKDGSPKLV PQCTYPLTGV GCVNRVYTDV 
ATFEITPDGV RVCETFETSY DELADRLDLT LLPPQG