Gene Noca_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0968 
Symbol 
ID4597501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1016240 
End bp1017004 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID639775571 
ProductABC transporter related 
Protein accessionYP_922178 
Protein GI119715213 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0806647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGGG TTGCGGAGCC CCGCCCTGCT GTCGACGCCC GCGTGGGCAG CGAGGGCACC 
CGGATCGACC TCGACGACGT CTGTCGCTAC TTCGTGGTCG GCGACAGTGT GGTCAAGGCC
CTCGACGACG TGTTCCTCCA TGTCGACGAG TCGGCCTTCG TCGTCGTGCT CGGCGCCTCG
GGCTCCGGGA AGACGACCCT GCTCAACCTG ATCGGCGCCC TGGACGCACC CACGGCCGGC
ACCGTGCGCC TGGCCGGGGT GGAGCTGACC GGCGCGTCGC GGGCCGAGCG GACCCGCGTG
CGCCGCAGCA CGGTCAGCTT CATCTTCCAG AGCTTCAACC TGTTTCCCGG GCTCACCGCC
CTGGAGAACG TGCAGTTCGG CGCGGACGTC GCCGGCCGCC CGGCCGCGGA GTCGGTGGCG
CGCGAGGTGC TCGACCAGGT CGGGCTGGGT GACCGGGGCA GCCACTTCGC GCACCAGCTC
TCCGGCGGCG AGCAGCAGCG GGTCGCGATC GCGCGGGCGC TGGCGACCGG CAACCCGATC
CTGCTGGCGG ACGAGCCCAC CGGCGAGCTG GACTTCCGCA CCGGCGTACA GATCCTGGAG
CTCCTGCGCG CCCAGGCGGA GGCGGGGAAG ACCGTGATCG TCGTGACGCA CAACCGCGAG
ATCTCGCGCG TGGCCGACCG GGTGATCGAG CTGTCGAGCG GCCGGATCGT CGCCGACGGC
GCGCCCCCGG GCGGTCCGGC CGCGATCGCG GACCTGCACT GGTAG
 
Protein sequence
MAGVAEPRPA VDARVGSEGT RIDLDDVCRY FVVGDSVVKA LDDVFLHVDE SAFVVVLGAS 
GSGKTTLLNL IGALDAPTAG TVRLAGVELT GASRAERTRV RRSTVSFIFQ SFNLFPGLTA
LENVQFGADV AGRPAAESVA REVLDQVGLG DRGSHFAHQL SGGEQQRVAI ARALATGNPI
LLADEPTGEL DFRTGVQILE LLRAQAEAGK TVIVVTHNRE ISRVADRVIE LSSGRIVADG
APPGGPAAIA DLHW