Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0968 |
Symbol | |
ID | 4597501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1016240 |
End bp | 1017004 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639775571 |
Product | ABC transporter related |
Protein accession | YP_922178 |
Protein GI | 119715213 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0806647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGGG TTGCGGAGCC CCGCCCTGCT GTCGACGCCC GCGTGGGCAG CGAGGGCACC CGGATCGACC TCGACGACGT CTGTCGCTAC TTCGTGGTCG GCGACAGTGT GGTCAAGGCC CTCGACGACG TGTTCCTCCA TGTCGACGAG TCGGCCTTCG TCGTCGTGCT CGGCGCCTCG GGCTCCGGGA AGACGACCCT GCTCAACCTG ATCGGCGCCC TGGACGCACC CACGGCCGGC ACCGTGCGCC TGGCCGGGGT GGAGCTGACC GGCGCGTCGC GGGCCGAGCG GACCCGCGTG CGCCGCAGCA CGGTCAGCTT CATCTTCCAG AGCTTCAACC TGTTTCCCGG GCTCACCGCC CTGGAGAACG TGCAGTTCGG CGCGGACGTC GCCGGCCGCC CGGCCGCGGA GTCGGTGGCG CGCGAGGTGC TCGACCAGGT CGGGCTGGGT GACCGGGGCA GCCACTTCGC GCACCAGCTC TCCGGCGGCG AGCAGCAGCG GGTCGCGATC GCGCGGGCGC TGGCGACCGG CAACCCGATC CTGCTGGCGG ACGAGCCCAC CGGCGAGCTG GACTTCCGCA CCGGCGTACA GATCCTGGAG CTCCTGCGCG CCCAGGCGGA GGCGGGGAAG ACCGTGATCG TCGTGACGCA CAACCGCGAG ATCTCGCGCG TGGCCGACCG GGTGATCGAG CTGTCGAGCG GCCGGATCGT CGCCGACGGC GCGCCCCCGG GCGGTCCGGC CGCGATCGCG GACCTGCACT GGTAG
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Protein sequence | MAGVAEPRPA VDARVGSEGT RIDLDDVCRY FVVGDSVVKA LDDVFLHVDE SAFVVVLGAS GSGKTTLLNL IGALDAPTAG TVRLAGVELT GASRAERTRV RRSTVSFIFQ SFNLFPGLTA LENVQFGADV AGRPAAESVA REVLDQVGLG DRGSHFAHQL SGGEQQRVAI ARALATGNPI LLADEPTGEL DFRTGVQILE LLRAQAEAGK TVIVVTHNRE ISRVADRVIE LSSGRIVADG APPGGPAAIA DLHW
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