Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0965 |
Symbol | |
ID | 4597498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1013579 |
End bp | 1015165 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 639775568 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_922175 |
Protein GI | 119715210 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.19081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCAGG AGTACGACGC CGTGGTCGTC GGCGCCGGGC CCAACGGGCT GGTCGCCGCC AACCACCTGG TCGACCGCGG GTGGTCGGTG CTCGTGCTGG AGGCCCAGCC GGACGTCGGC GGCGCCGTCG CCAGCGACCG TGAGGTGCAC CCGGACTTCG TCCACGACAC GTTCAGCGCG TTCTACCCGC TCGCCGCGGT GTCGCGCGCC ATCCAGGGGT TCGCGCTGGA GGAGCACGGG CTGCGCTGGA CGCACGCGCC CGCCGTCCTC GGCCACCAGC TTCCGGCCGG CGCCTGGGCC CTCCTGCACC GCGACCGCGA GGTCACCGCC GGCCTGATGG ACGCCCAGCA CCCCGGCGAC GGCGCGGCCT GGCTCGAGCT GTGCGGGGAC TGGGACCGGA TCGGCGGCGC GATCGTGGAC GCGCTGCTGA CCCCGTTCCC GCCGGTGCGG CCGGGGCTCT CGGTGCTGGC GCGGCTGCGC TCGGTCGGCG GCCTGCGCTT CGTCCGGGAG CTGCTCACCC CGGCCGCCGA CCTGGGTCGG CACCGGTTCG GGGGCGCGGC GCCGCGGATC CTGCTGGCCG GCAACGCCGG GCACGCCGAC ATCCCGCTCA CCTCGCCCGG CTCCGGCCTG ATGGCGCTGC TGCTGACCAT GCTCGGCCAG ACCGTGGGCT TCCCCGTCCC GGTCGGTGGC GCCGGGCACT TCGCGCAGGC GCTCGCCGCC CGGCTGCGGG CGAAGGGCGC CGAGATCCAC TGCGCCAGCG AGGTCACGGC GATCGAGGTG GCGGGCGGGC GTGCCGTCGC GGTGCGGACG GCGGCCGGGG AGCGGTACGC CGCGGGCCAC GCGGTGATCG CCGACGTGTC GGCGCCGAGC CTCTACGGCC GCCTGCTACC GGCCGAGGCG CTCCCCGCCC GGACCCGCGC CGGGATGCGG TCCTTCGAGA TGGACCCCCG GACGGTGAAG GTGGACTGGG CCCTGTCCGG ACCGGTCCCG TGGTGGGTGC CTCCGGCGTA CGACCCGGGG ACCGTGCACG TCGCCGACTC GGTCGAGGAG ATCGGTGCGG CCCTGCACCA GGTCGCGTCG CGGACGATCC CGGCGGCGCC GTTCCTGCTC GCCGGCCAGA TGACCACGAC CGACCCCACC CGCTCGCCGG CGGGGACCGA GTCGATGTGG GCCTACACGC ACGTGCCGCA GCAGACGGCG CACGACGCCG GGGACGGGAC CATCCGCGGC GTGTGGGACG AGACGGACTG CGAGCGCTTC GCCGACCGGA TGCAGGCCCG CATCGAGGGT CTCGCGCCCG GGTTCGGCGA CCGGGTGCTC GCCCGCCGGG TGCTCGGGCC GCACGAGCTG GAGGCCCGCG ACGCCAACCT CGTGGGCGGT GGCCTCAACG GGGGTACGGC GCAGCTGCAC CAGCAGCTGG TGTTCCGTCC GGTGCCCGGC CTCGGGCGGG CCGAGACGCC CGTGCGCGGG CTCTACCTCG GCTCAGCGGC TGCGCACCCC GGCGGCGGCG TGCACGGCGC GCCCGGCACG AATGCCGCCC GCGCCGCGCT CGCCCACCGC CGGGCGCGCT TCCTGGTCCG CCGCTGA
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Protein sequence | MSQEYDAVVV GAGPNGLVAA NHLVDRGWSV LVLEAQPDVG GAVASDREVH PDFVHDTFSA FYPLAAVSRA IQGFALEEHG LRWTHAPAVL GHQLPAGAWA LLHRDREVTA GLMDAQHPGD GAAWLELCGD WDRIGGAIVD ALLTPFPPVR PGLSVLARLR SVGGLRFVRE LLTPAADLGR HRFGGAAPRI LLAGNAGHAD IPLTSPGSGL MALLLTMLGQ TVGFPVPVGG AGHFAQALAA RLRAKGAEIH CASEVTAIEV AGGRAVAVRT AAGERYAAGH AVIADVSAPS LYGRLLPAEA LPARTRAGMR SFEMDPRTVK VDWALSGPVP WWVPPAYDPG TVHVADSVEE IGAALHQVAS RTIPAAPFLL AGQMTTTDPT RSPAGTESMW AYTHVPQQTA HDAGDGTIRG VWDETDCERF ADRMQARIEG LAPGFGDRVL ARRVLGPHEL EARDANLVGG GLNGGTAQLH QQLVFRPVPG LGRAETPVRG LYLGSAAAHP GGGVHGAPGT NAARAALAHR RARFLVRR
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