| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0954 |
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| Symbol | |
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| ID | 4597487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1003517 |
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| End bp | 1006012 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639775557 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_922164 |
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| Protein GI | 119715199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTGCG AGCATGCCGC CATGCGTGCC CGCTCCTTGC GCTCGACCGC TGCCGGACTC
GCCCTCGTCG CCGGCCTGCT GGTGACCGGT GCGCCGGCCA CCTCGGCCGC CGACGGTCCG
GACGGCCGGA CGTCGGGCGG GTCGGCGCCG GACCGGGCCG CGCCCGACGG GTCCGACGGG
ATGCACGCCG TGGTGAGCGC CCCCATCGGC GGCGACTGGT CGGTGCGCTT CGTCGACCGC
GACGGCACCG TGTTGGCCAC GGTCGCGCGG GACGCGATCG CGCTGGTCAC GGCGGCCGGG
CGGGTGCCCG CCGACCACGT GGTGGCCGTG CACGACGACG ACGTCGTCGA GCTCGGCACG
GCCGATCCCG CGCTCACCGC GAGCGTGCGG GTCAGCCCTG CGGGCGACGG CGCGTACGCC
GTGGCGGTGG CCGGGTCGGG CAGCGGGATC ACTGCGGTGT CGATCGACTT CCGCGCGCCC
CGCGACGAGC GCTACCTCGG CCTGGGCGAG CGCTCGGACG CCGTGGACCA TCGCGGCCGT
GAGGTGCAGA ACCGGGTCCT GGACGGCCCC TACACGACCA GCCAGGCGCT GCTCGTGTCC
GGCTTCGTCC CGCAGCCCGG CTACAGCAGC CGCGCGGACG CGACGTACTT CCCGGTGCCG
TGGGTGCTCT CGACCGCCGG GTACGGCGTG CTCGTCGACA ACGACGAGGA CAGCTCCTTC
GAGCTCGCGA CGCGGCAGCA CCCGGACGTG AGCCGGCTGG TGGTCCGGTC CGACCGGCTC
GACCTGCGCG TCTTCTCGGG ACCGACGCCG GCGCGGGCCC TGGCCCGGAT GACCGGTGCG
GTCGGCCGGC AGCCCGCCCC GGCCAGCCCG ATGGTCTACG GCGCCTGGTG GCAGCCGGTC
GGTGATGCCG TGGCCGGGCT CGCGGAGCAG CGCGACCGCG ACGTCGCGAT CTCGGTCGCC
CAGACCTACG TCCACTACCT GCCCTGCGGG GCCCAGGACT CCGCGCGCGA GCGCGCCCTC
ACCGAGGCGC TGCACGGCCG GGGCGTGGGG GTGACGACGT ACTTCAACCC GATGGTCTGC
ACGAGCTACC AGCCGGTCTA CGACGAGGGC GTCGCCGCGG GCGCGTTCAC CCGCAACCCC
GACGGCTCAC CGCTGGTCTA CCGCTACTCG ACCGCGACGA ACTTCCGGGT CTCCCAGCTC
GACTTCTCCG CCGCGCCCGG CCGCGACCTC TTCCACCAGC TGCTCGACGA GGCGGTCGCG
GACGGCTACG ACGGCTGGAT GGAGGACTTC GGCGAGTACA CCCCCGCGAC CGCGGTGTCG
GCCGACGGCA CCCCGGGGCC GACGATGCAC AACCGGTACG TCGAGCAGTA CCACGCCGCC
GCCCGCGACT TCGAGACCCA GGCATCGCGG CCGCTGCTGC GGTTCAACCG CTCCGGGTGG
ACCGATGCCA TCAAGGAGTC CTCGATCGTG TGGGGCGGTG ACCCCACCAC CTCGTGGGAC
TTCGACGGCC TGTCCTCCTC GGTCCGCCAG GGCCTGACCA GCGGCACCTC CGGGCTGTCC
TTCTGGGGGC CGGACATCGG CGGCTTCTTC ACCCTGCCCG GCGACCCGAC GCTGACACCC
GAGCTGCTGG CCCGATGGAT CGAGTACGGC GCCTTCACCG GCGTGATGCG GCTGCAGTCC
GGAGGCATCT CGATCGGTGT CTCCGGCGAA CGGCCCATGG TCACCGACCC GACGGTTGCC
CCGGTGTGGA AGCGCTACAC CCGCCTGCGC ACGATGCTCT ACCCCTACAT CGCCGGCAGC
CAGGACGCCT ACCTGCAGCG GGGACTGCCG CTGATGCGGC ACCTCGCCCT GGTCCATCCC
GCTGACGGGC AGGCCGTGCG CGCGGACGAC GAGTACCTCT TCGGCCGCGA CCTGCTCGTG
GCCCCGGTGA CCAGTCCGGG CGCCAGCACG CGACCGGTGT ACCTCCCCCG CGGTCACTGG
ATCGAGCTCG CCCGTGCCTG GCGGCTGCGC GACGACGGGC GCTTCGGCCT GCGGCACGCC
GACGTGGTGC GCGGGCACCG CACCGTGACC GCCCGGGCAC CGCTCGGCAC CATCCCGCTG
TTCCTGCGCG CCGGCGCGGT CGTGCCGCTG CTGCCGCGCG GCGTCGACAC CCTCAGCGAC
TACGGCGACG GCATCGTCCG GCTGGCCGAC CGGGCCGCTC GGCGTACCCT CCTCGCCGCG
CCGCGGTCCG GGACCTGGCG GGGCGCCCTC GGCCCGGGCG AGACGCTGCG CTCGGAGGTC
ACCCGTGGGT CCTGGACGCT ACGGCTCGAC GCGGCGGACG CGCGGACGTA CGCCGTGCGG
GCGACGCTGG CGGGCCTCGA CCCCGCCTGG CGGCCGTGCG AGGTCCGGGC CGACGGCGCC
CGGGTGCGGT TCGAGTACGC GCCCGGCCGG CAGGTGCTGC GGTTCAGCGC CGGTCCCGCC
GCCGGAGGCG AGGTGCGGGT CAGCGCCTGC CGCTAG
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| Protein sequence | MSCEHAAMRA RSLRSTAAGL ALVAGLLVTG APATSAADGP DGRTSGGSAP DRAAPDGSDG
MHAVVSAPIG GDWSVRFVDR DGTVLATVAR DAIALVTAAG RVPADHVVAV HDDDVVELGT
ADPALTASVR VSPAGDGAYA VAVAGSGSGI TAVSIDFRAP RDERYLGLGE RSDAVDHRGR
EVQNRVLDGP YTTSQALLVS GFVPQPGYSS RADATYFPVP WVLSTAGYGV LVDNDEDSSF
ELATRQHPDV SRLVVRSDRL DLRVFSGPTP ARALARMTGA VGRQPAPASP MVYGAWWQPV
GDAVAGLAEQ RDRDVAISVA QTYVHYLPCG AQDSARERAL TEALHGRGVG VTTYFNPMVC
TSYQPVYDEG VAAGAFTRNP DGSPLVYRYS TATNFRVSQL DFSAAPGRDL FHQLLDEAVA
DGYDGWMEDF GEYTPATAVS ADGTPGPTMH NRYVEQYHAA ARDFETQASR PLLRFNRSGW
TDAIKESSIV WGGDPTTSWD FDGLSSSVRQ GLTSGTSGLS FWGPDIGGFF TLPGDPTLTP
ELLARWIEYG AFTGVMRLQS GGISIGVSGE RPMVTDPTVA PVWKRYTRLR TMLYPYIAGS
QDAYLQRGLP LMRHLALVHP ADGQAVRADD EYLFGRDLLV APVTSPGAST RPVYLPRGHW
IELARAWRLR DDGRFGLRHA DVVRGHRTVT ARAPLGTIPL FLRAGAVVPL LPRGVDTLSD
YGDGIVRLAD RAARRTLLAA PRSGTWRGAL GPGETLRSEV TRGSWTLRLD AADARTYAVR
ATLAGLDPAW RPCEVRADGA RVRFEYAPGR QVLRFSAGPA AGGEVRVSAC R
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