Gene Noca_0953 details

Gene Information

• Locus tag: Noca_0953
• ID: 4597486
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1001486
• End bp: 1003498
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639775556
• Product: von Willebrand factor, type A
• Protein accession: YP_922163
• Protein GI: 119715198
• COG category: [R] General function prediction only
• COG ID: [COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGACC GGACCCGGTT CAAGCGGTAC GACGGCGGAC CGGACCCGCT CGCGCCGCCC 
GTCGACCTGG CCGAGGCCCT GGACGCCATC GGCGAGGACG TGATGGCCGG GTACTCCCCG 
GAGCGGGCGA TGCGGGAGTT CCTGCGCCGC GGTGGGCGCG ACCAGTCCGG TCTCGACGAG 
CTGGCCCGCC GGGTGGCGGA GCGGCGTCGC GAGCTCACCC AGCGGCACCA CCTCGACGGC 
ACCCTGAACG AGGTGCGGGA ACTGCTCGAC CGGGCGTTGC TCGAGGAACG CAAGCAGCTG 
GCCCGCGACG CGATGATGGA CGACGCCGAC CGGGCCTTCC GTGAGCTGCG CCTGGAGAAC 
CTGCCCTCGT CGACGGCGGC GGCGGTGAGC GAGCTGTCGT CGTACGACTG GCAGAGCCGG 
GAGGCGCGCG AGAGCTACGA GAAGATCAAG GACCTGCTCG GCCGCGAGCT GCTCGACCAG 
CGCTTCGCCG GCCTGAAGCA GGCACTCGAG AACGCGACGG ATGCGGACCG CGCGGCGGTC 
AACGAGATGC TCCAGGACCT CAACGACCTG CTCGACAAGC ACCGGCGCGG CGAGGACACC 
CAGGCCGACT TCGACCGGTT CATGGCCGAG CACGGCGACT TCTTCCCCGA GCGGCCCAAG 
GACATCGACG AGCTGCTGGA CGCGCTGGCG CAGCGTTCCG CCGCCGCCCA GCGGATGCTG 
AACTCGATGT CGCCCGAGCA GCGCCAGGAG CTGATGGAGC TCTCGGCGCA GGCGTTCGGG 
TCGCCCGAGC TGATGGATCA GCTCGCGCGC ATGGACGCCA ACCTGCAGGC GCTGCGGCCG 
GGGGAGGACT GGGGCGGCTC GGAGCGCTTC GACGGCGAGG AGGGGCTCGG GCTCGGCGAC 
GGCACCGGGG TGCTCCAGGA CCTCGCCGAC CTCGACGACC TGGCCGACCA GCTCTCCCAG 
TCGTACGGCG GCGCCCGCAT GGACGACCTC GACCTCGACA AGCTCGCCCG CCAGCTCGGC 
GACGAGGCCG CGGTCGACGC CCGTACCCTG CAGCGGCTCG AGCAGGTGCT GCGCGACTCC 
GGCTACCTCA AGCGCGGCAC CGACGGCCAG CTCCGGCTCT CACCGAAGGC GATGCGCCGG 
CTCGGCAAGG CGCTGCTGCG CGACGTCGCC GAGCGGATCT CGGGCCGCCA GGGCCAGCGC 
GACCTGCAGC GCGCCGGCGC GGCCGGCGAC CTGTCGGGCG CGACCCGGGA GTGGGCGTTC 
GGCGACACCG AGCCCTGGCA CGTGCCGCGC ACCATGCTGA ACGGCGTGCT GCGCCGCGCC 
GGCGATCCGT CCGCCTCGCT GCTGGACATC GGCGACGTGG AGGTGCAGGA GACCGAGGCC 
CGCACCCAGG CCGCCGTCGC GCTGCTGGTG GACACCTCGT TCTCGATGGC GATGGATGGC 
CGCTGGGTCC CGATGAAGCG GACCGCGCTC GCGCTGCACA CGCTGATCCG CTCCCGGTTC 
CGCGGCGACC ACCTGCAGCT GATCGGCTTC GGCCGGCACG CCGAGGTGAT GGAGATCGAG 
CAGCTGACCG CCCTCGACGC CCGCTGGGAC AAGGGCACCA ACCTGCACCA CGCCCTGCTG 
CTCGCCAACC GGCACTTCCG CAAGCACCCG AGCGCCCAGC CGGTGCTGCT CATCGTCACC 
GACGGCGAGC CGACCTCCCA CCTCGAGCCC GACGGCGAGG TCTACTTCTC CTACCCGCCG 
CACCCGCTCA CCGTGGCGTA CGCCGTCCGC GAGCTCGACG CCGCCGGCCG GCTCGGCGCG 
CAGACGACGT TCTTCCGGCT CGGCGACGAC CCGGGCCTGG GCCGGTTCAT CGACCAGATG 
GCCCGCCGCG TCGACGGCCG GGTGGTCGCT CCCGAGCTCG ACGACCTCGG CGCCGCGGTC 
GTCGGCTCCT ACCTCGGCTC CCGCCGGCCC AGCGCGGGCT ACGGCGGCTA CGGCGACTGG 
TTCGGCGGCC GCGGCTTCTG GGTCGGCGAC TAG 

 

Protein sequence

MKDRTRFKRY DGGPDPLAPP VDLAEALDAI GEDVMAGYSP ERAMREFLRR GGRDQSGLDE 
LARRVAERRR ELTQRHHLDG TLNEVRELLD RALLEERKQL ARDAMMDDAD RAFRELRLEN 
LPSSTAAAVS ELSSYDWQSR EARESYEKIK DLLGRELLDQ RFAGLKQALE NATDADRAAV 
NEMLQDLNDL LDKHRRGEDT QADFDRFMAE HGDFFPERPK DIDELLDALA QRSAAAQRML 
NSMSPEQRQE LMELSAQAFG SPELMDQLAR MDANLQALRP GEDWGGSERF DGEEGLGLGD 
GTGVLQDLAD LDDLADQLSQ SYGGARMDDL DLDKLARQLG DEAAVDARTL QRLEQVLRDS 
GYLKRGTDGQ LRLSPKAMRR LGKALLRDVA ERISGRQGQR DLQRAGAAGD LSGATREWAF 
GDTEPWHVPR TMLNGVLRRA GDPSASLLDI GDVEVQETEA RTQAAVALLV DTSFSMAMDG 
RWVPMKRTAL ALHTLIRSRF RGDHLQLIGF GRHAEVMEIE QLTALDARWD KGTNLHHALL 
LANRHFRKHP SAQPVLLIVT DGEPTSHLEP DGEVYFSYPP HPLTVAYAVR ELDAAGRLGA 
QTTFFRLGDD PGLGRFIDQM ARRVDGRVVA PELDDLGAAV VGSYLGSRRP SAGYGGYGDW 
FGGRGFWVGD