Gene Noca_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0942 
Symbol 
ID4597475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp988484 
End bp989938 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content68% 
IMG OID639775545 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_922152 
Protein GI119715187 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACATCC TCGACGTCGC CCGGTGGCAG TTCGGCATCA CCACCGTCTA CCACTTCCTG 
TTCGTCCCAC TGACCATCGG CCTGACGCTG CTGGTCGCCG TCATGGAGAC CAATTGGTTG
CGTACGGCGC GACCGGAGTG GCTGCGGCTG GCGAAGTTCT TCGGCAAGCT GCTGCTGATC
AACTTCGCGC TCGGCCTGGT GACCGGTATC GTGCAGGAGT TCCAGTTCGG GATGAACTGG
TCGGACTACT CCCGGTTCGT CGGTGACATC TTCGGCGCAC CGCTCGCCGT CGAGGCGCTG
CTCGCGTTCT TCCTCGAGTC GACGTTCCTC GGCCTCTGGA TCTTCGGGTG GGACAAGCTG
CCGCGCAAGC TGCACGTGGG CTGCATGTGG CTGGTCCACC TCGGCACCCT GGCGTCGGCG
TGGTTCATCC TCGCGGCCAA CTCCTGGATG CAGCACCCGG TCGGCTACGA GTACAACCCC
GACACCGGGC GCGCGGAGCT CACCGACTTC TGGGCCGTGA TGACCAACAA GGTCCAGCTC
ATCACGTTCC CGCACGTGAT CCTGGCGGCG TACATGACGT CGGCGGCCTT CATCCTCGGC
ATCAGCGCCT GGCTCTACGC CAACAAGCGC TTCGAGCGGG ACCGCTCGAT GTACCGGATG
GGCATCCGGA TGGGGGCCTG GGTGGCGCTG GTCGCCGGCC TCGGCGTGGC CGTCAGCGGC
GACATCCAGG GCAAGATCAT GACCGACGTC CAGCCCATGA AGATGGCGGC GGCCGAGGCG
CTCTACCAGA CCGACTCCGA CGGCTGCGCA CCGTTCTCGG TCTTCACGAT CGGCACGCCG
GACGGCAAGA GCGAGAAGTG GTCCCTGACC GTCCCGTGCG TCCTGTCCTT CCTCGCCGAG
GGCGACACCG ACGCGACGGT CGAGGGCATC GACGACCTGC GCGCCGAGTA CCAGGAGACC
TACGGCCAGG ACCCGGGCGC GGCGTACTAC TCCCCGGGTG ACTACACGCC GTACATCCCG
GTCACCTACT GGAGCTTCCG CCTGATGATC GGGCTCGGCG CGCTGATGGC CGCCGGCGCC
GCCCTGGTGC TGTGGCTGAC CCGCAAGGGC CGCGCGCCGA CCGCGCGGTG GTTCGCGCCG
ATGGTGCTCA GCCTCCCGGT CCTCACCGTG CTCGCGAACT CCTTCGGCTG GATCTTCACC
GAGATGGGCC GTCAGCCCTG GGCGGTGTTC GGCCTGATGA CCACCGCGCA CGGCGTCTCA
CCCGGCGTGA GCCAGCTCGA GGCCTGGATC TCGATCGTCG TGCTGACCCT GCTGTACGCC
GTGCTGGCGG TGATCGAGGT CGGGCTGCTG GTGAAGTACG TGAGGAAGGG CGCCGACCCG
TTCGAGGAGC CTCCGGACCC GACGCTGCGC GGCAGCGACG AGGACGAGGA CCGACCCCTG
GCGTTCGCCT ACTAA
 
Protein sequence
MDILDVARWQ FGITTVYHFL FVPLTIGLTL LVAVMETNWL RTARPEWLRL AKFFGKLLLI 
NFALGLVTGI VQEFQFGMNW SDYSRFVGDI FGAPLAVEAL LAFFLESTFL GLWIFGWDKL
PRKLHVGCMW LVHLGTLASA WFILAANSWM QHPVGYEYNP DTGRAELTDF WAVMTNKVQL
ITFPHVILAA YMTSAAFILG ISAWLYANKR FERDRSMYRM GIRMGAWVAL VAGLGVAVSG
DIQGKIMTDV QPMKMAAAEA LYQTDSDGCA PFSVFTIGTP DGKSEKWSLT VPCVLSFLAE
GDTDATVEGI DDLRAEYQET YGQDPGAAYY SPGDYTPYIP VTYWSFRLMI GLGALMAAGA
ALVLWLTRKG RAPTARWFAP MVLSLPVLTV LANSFGWIFT EMGRQPWAVF GLMTTAHGVS
PGVSQLEAWI SIVVLTLLYA VLAVIEVGLL VKYVRKGADP FEEPPDPTLR GSDEDEDRPL
AFAY