| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0935 |
|---|
| Symbol | |
|---|
| ID | 4597467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 980491 |
|---|
| End bp | 981345 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639775537 |
|---|
| Product | uracil-DNA glycosylase superfamily protein |
|---|
| Protein accession | YP_922145 |
|---|
| Protein GI | 119715180 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC TGCTCCCGCA CCCCGCCACC CGGGAGCTGT TCCCGTCCCC GGTGCCGCCC
GGCACCGGGT GGCCGGGCGA TCCCGCGACG GAGCGGACAC CGGTCGCCAC GACCGCGGCG
CAGGTGCGCC GGCTGGCCCG GGTCGGCGAA GGGGTCGACG AGCTGGCCGA GCTCGACGCG
CGGGTCTCGG TCTGCCGGGC CTGCCCGCGC CTGGTTCGCT GGCGCGAGGA CGTGGCCCGG
GACAAGCGCG CGTCCTTCGC CACCGAGCCC TACTGGGGCC GACCGGTCCC CGGCTGGGGC
ACCACCGACC CGAGCGTGCT GATCGTCGGG CTCGCCCCGG CCGCGAACGG TGCCAACCGG
ACCGGCCGGA TCTTCACCGG CGACCGCAGC GGCGACTGGC TGTTCGCGGG GCTGCACCGC
GTCGGCCTGG CCCGCACCGC TACGAGCACG CACGCCGACG ACGGCCAGGA GCTGATCGGC
ACCAGGATGA TCGCCACGGT GCGCTGCGCG CCGCCGCAGA ACAAGCCGAC CGTCGTGGAG
CGGGACACCT GCGCCCCCTG GCTGCTCGCC GAGCTGGGCC TGGTGCTGCC GACGGTCGAG
GTGGTGGTCG CGCTCGGCAC CTTCGGCTGG GACGCCACGC TGCGCTCGTT CGCCGGGCTG
GGCTGGCAGG CCAGCCGACC GCGGCCGCGG TTCGGCCACG GCGTGGAGAC CCGCCTGGTC
GGGCCGGGCC GCGAGGTGAC GCTGCTGGGC TGCTACCACC CGAGCCAGCA GAACACCTTC
ACCGGCCGGC TCACCGAGGT GATGCTCGAC GACGTCCTGC GCCGCGCTGC CGTTCTTGGC
AGGATCACGG GGTAG
|
|---|
| Protein sequence | MTDLLPHPAT RELFPSPVPP GTGWPGDPAT ERTPVATTAA QVRRLARVGE GVDELAELDA
RVSVCRACPR LVRWREDVAR DKRASFATEP YWGRPVPGWG TTDPSVLIVG LAPAANGANR
TGRIFTGDRS GDWLFAGLHR VGLARTATST HADDGQELIG TRMIATVRCA PPQNKPTVVE
RDTCAPWLLA ELGLVLPTVE VVVALGTFGW DATLRSFAGL GWQASRPRPR FGHGVETRLV
GPGREVTLLG CYHPSQQNTF TGRLTEVMLD DVLRRAAVLG RITG
|
|---|
| |