Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0922 |
Symbol | |
ID | 4599605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 968028 |
End bp | 968777 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 639775524 |
Product | membrane-bound lytic murein transglycosylase B-like |
Protein accession | YP_922132 |
Protein GI | 119715167 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.226627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCTG CCCGCCTGAT CGCGTCGTTC GCCACGGCGC TGCTCGTCGT CGCCGGGCTG GGGTACGCCG CCTCCCAGAC CGTGCTGGCG CGTCCCGAGC TGCCCGCGAC CAGGTCCTCG GCGTACGTCG ACGCCCCGCG TCCGGACACC CGGGTGCAGG CCGCCCGGCG CGCCGGCGCG CCGCGGGCCC CGGCGCGGGT GGACCCTCGC TGGGTCGCCG ACACCGCCGC GCGGGCCGGC ATCCCGGCGC CCGCGGTGCG CGCGTACGCG AACGCACAGC TGGCCGAGCC CGCGGGCTGC GAGGTCGGCT GGACGACGCT GGCCGGCATC GGCTGGGTCG AGTCGCACCA CGGCACCATC GACGGCCGCA CCCTCGGCGA GGACGGCCGC TCCTCGACGC CGATCCTCGG CCCCGCGTTG AACGGTCGCG GCGAGGTCGC CGCGATCCCG GCCACCCCGG AGTCCAGCGC GTGGCACGGC GACCCGTCCT GGGACCACGC GGTCGGGCCG CTGCAGTTCA TCCCGTCGAC GTGGGCGACC TGGGGCGCCG ACGGCGACGG TGACGGGACC GCCGACCCGA ACGACCTCGA CGACGCGGCC GTCACGGCGG CCCGGTACCT GTGCGCCGAC GGCCACGACC TCGAGACCGG CCAGGGTTGG GCGGACGCGG TGTTCGCCTA CAACCACGCC CAGTCCTACG TGGACGCGGT CTACGCCGCG GCCTCGGCGT ACTCCGACCG CACCGGCTGA
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Protein sequence | MSPARLIASF ATALLVVAGL GYAASQTVLA RPELPATRSS AYVDAPRPDT RVQAARRAGA PRAPARVDPR WVADTAARAG IPAPAVRAYA NAQLAEPAGC EVGWTTLAGI GWVESHHGTI DGRTLGEDGR SSTPILGPAL NGRGEVAAIP ATPESSAWHG DPSWDHAVGP LQFIPSTWAT WGADGDGDGT ADPNDLDDAA VTAARYLCAD GHDLETGQGW ADAVFAYNHA QSYVDAVYAA ASAYSDRTG
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