Gene Noca_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0922 
Symbol 
ID4599605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp968028 
End bp968777 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content77% 
IMG OID639775524 
Productmembrane-bound lytic murein transglycosylase B-like 
Protein accessionYP_922132 
Protein GI119715167 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.226627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTG CCCGCCTGAT CGCGTCGTTC GCCACGGCGC TGCTCGTCGT CGCCGGGCTG 
GGGTACGCCG CCTCCCAGAC CGTGCTGGCG CGTCCCGAGC TGCCCGCGAC CAGGTCCTCG
GCGTACGTCG ACGCCCCGCG TCCGGACACC CGGGTGCAGG CCGCCCGGCG CGCCGGCGCG
CCGCGGGCCC CGGCGCGGGT GGACCCTCGC TGGGTCGCCG ACACCGCCGC GCGGGCCGGC
ATCCCGGCGC CCGCGGTGCG CGCGTACGCG AACGCACAGC TGGCCGAGCC CGCGGGCTGC
GAGGTCGGCT GGACGACGCT GGCCGGCATC GGCTGGGTCG AGTCGCACCA CGGCACCATC
GACGGCCGCA CCCTCGGCGA GGACGGCCGC TCCTCGACGC CGATCCTCGG CCCCGCGTTG
AACGGTCGCG GCGAGGTCGC CGCGATCCCG GCCACCCCGG AGTCCAGCGC GTGGCACGGC
GACCCGTCCT GGGACCACGC GGTCGGGCCG CTGCAGTTCA TCCCGTCGAC GTGGGCGACC
TGGGGCGCCG ACGGCGACGG TGACGGGACC GCCGACCCGA ACGACCTCGA CGACGCGGCC
GTCACGGCGG CCCGGTACCT GTGCGCCGAC GGCCACGACC TCGAGACCGG CCAGGGTTGG
GCGGACGCGG TGTTCGCCTA CAACCACGCC CAGTCCTACG TGGACGCGGT CTACGCCGCG
GCCTCGGCGT ACTCCGACCG CACCGGCTGA
 
Protein sequence
MSPARLIASF ATALLVVAGL GYAASQTVLA RPELPATRSS AYVDAPRPDT RVQAARRAGA 
PRAPARVDPR WVADTAARAG IPAPAVRAYA NAQLAEPAGC EVGWTTLAGI GWVESHHGTI
DGRTLGEDGR SSTPILGPAL NGRGEVAAIP ATPESSAWHG DPSWDHAVGP LQFIPSTWAT
WGADGDGDGT ADPNDLDDAA VTAARYLCAD GHDLETGQGW ADAVFAYNHA QSYVDAVYAA
ASAYSDRTG