| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0909 |
|---|
| Symbol | |
|---|
| ID | 4599592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 951523 |
|---|
| End bp | 952566 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639775511 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_922119 |
|---|
| Protein GI | 119715154 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGGA CGTGGCAGAA TCCTGACCAG CCCCCTCCGG CGACCCCTTC CACGACCGAG
GAGCAGCGCA CCGTGACCGG TATGAAGAGG ACCACCGAGA AGAACCTCAT GGTCTTCAGT
GGCCGGGCCC ACCCTGTGCT CGCGGAGGAG GTCGCGACCC TGCTGGGCAC CCCGCTGGTG
CCCCAGTCGG CGTACGAGTT CGCGAACTCC GAGATCTACG TGCGCTACGA GGAGTCCGTG
CGCGGCTGTG ACGCGTTCGT GCTGCAGAGC CACACCGCTC CGGTCAACGA GTGGATCATG
GAGCACCTGA TCATGGTCGA CGCGCTCAAG CGCGCCTCGG CCAAGCGGAT CACCGTGGTG
ATGCCGTTCT ACGGCTACGC CCGCCAGGAC AAGAAGCACA AGGGCCGCGA GCCGATCTCG
GCGCGGCTGA TGGCCGACCT GTTCAAGACC GCCGGCGCCA ACCGGCTGAT CACGGTCGAC
CTGCACGCCG ACCAGATCCA GGGCTTCTTC GACGGCCCGG TCGACCACCT GATGGCGCTG
CCGATCCTCG CGGACTACGT CCGGGACAAG TACGGTTCCC AGCCGCTCGC GGTGGTGTCG
CCGGACGCCG GCCGGATCAA GGTCGCCGAG CGCTGGTCGG CGCGCCTCGG GGGCGCGCCG
CTGGCGTTCA TCCACAAGAC CCGGCGCACC GACCGGCCGA ACGAGAGCGT CGCCAACCGC
GTCGTCGGCG ACGTGTCGGG GCGGATGTGC GTGCTGGTCG ACGACATGAT CGACACCGGT
GGCACCATCG TGAAGGCGGC CGAGGCGCTG ATGGCCGACG GCGCCGCGGG CGTGATCATC
GCCGCGACCC ACGCGATCCT CTCCGACCCG GCCGTGGACC GGCTCAAGAA CTGTTCGGCC
GTCGAGGTCG TGGTCACCAA CACGCTGCCG CTCGCACCCG AGTGCGAGTT CGACAAGCTC
ACCACGCTCT CGATCGCGCC ACTGATCTCC CGCGCGATCC GCGAGGTCTT CGAGGACGGC
TCCGTCACCT CGATGTTCGA GTAG
|
|---|
| Protein sequence | MNRTWQNPDQ PPPATPSTTE EQRTVTGMKR TTEKNLMVFS GRAHPVLAEE VATLLGTPLV
PQSAYEFANS EIYVRYEESV RGCDAFVLQS HTAPVNEWIM EHLIMVDALK RASAKRITVV
MPFYGYARQD KKHKGREPIS ARLMADLFKT AGANRLITVD LHADQIQGFF DGPVDHLMAL
PILADYVRDK YGSQPLAVVS PDAGRIKVAE RWSARLGGAP LAFIHKTRRT DRPNESVANR
VVGDVSGRMC VLVDDMIDTG GTIVKAAEAL MADGAAGVII AATHAILSDP AVDRLKNCSA
VEVVVTNTLP LAPECEFDKL TTLSIAPLIS RAIREVFEDG SVTSMFE
|
|---|
| |