Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0851 |
Symbol | |
ID | 4597910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 889104 |
End bp | 890294 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639775452 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_922061 |
Protein GI | 119715096 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.532444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTT TTCTCGCCTC CGGGCGGCTC CGCGGCCGTG GGCTCATCGC CCTGGCGGCC GCTGTAGCAG GGTCCGTAGT ACTCGCAGGG TGTGGCGGCG CCGCAGTCTC CGAGAGCAAG TCATCAGACG AACCGATCAA GATCGGCGTG TTGCTGCCCT ACACGGGTCC GTTCGGGCTC TACGGCAAGC CGATGGAGGC TGCCCTGACC GCCCGACTCA AGCTCGACGA CTTCAAGGTC GGCGACCGCT CGATCGAGCT CGTCTTCGAG GACGAGGCCA CCGATCCCGC CACGGCCGTG TCGAAGGCCA ACAAGCTCGT CGACCAGGAC GGGGTCTCGG CCGTGGTCTG CTGCGCGACG GGTGCGGCGA CGCTCGCGGT CGGACCCATC CTCGCCGAGC GGGGCATCCC CCAGCTCGGC CCGATCCCGA ACCCCGACGG ACTCTCCGAG TTCGCGACGG CTGCCGTGGC GGCACCGACC GCCGGCCACG ACGCCGGCAA GCTGGGCACC TACGCAGCGA CCGACCTGGA CTACCGGTCG GCCGTGATCG TGGCCAGCGA CTTCGCCTAC GGCCATGAGG TTGCCGAGAA CTTCAAGAAG GGCTTCACCG AGGCCGGCGG CTCGATCGTC AAGGAGGTCT ACGCGCCTCT CGGCACCAGC GACTTCGCCT CGTACCTCTC GCAGCTCCCC GACGCCGACG TCGTCTTCGC GGGCTTCGCC GGCGCCGACG CCATTCGCTT CGTGCAGCAG TACGACAAGT TCGGGGTGAA GGCCAAGATG CCGCTGATCG GGCACGGACC GCTCGTCACC GAGCTCGTCC TCAACCAGAT CGGCCCGGCC GCGGTCGGCG TCGGGGCCGC CTTCTACTAC TCCTCGACCC TCGACAACGC CGAGAACGAG CGGTTCATCT CGACCATGAA GGCCGCCAAT CCGGACTTCG TCCCCAGCCA CTTCACCGCC GGTGCGTGGG CCTCGGGGAG TGTCCTCCTC GACGCGATCG AGCGGGCCGG CGACGACGCG ACCGACGGCG AGAAGCTCGC CGCCGCCATC CGGAGCACCA AGATCGAAGC CCCGTGGGGT CCGCTCGCGT TCGACCCCGA CACCGGGTAC GCGATCGCGC CGACCTACTA CTACACCGTC GAGTCCTCGG CCACCGGCCT GTCCCACAAG ATCGTCACCG AGATCCCCTG A
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Protein sequence | MTSFLASGRL RGRGLIALAA AVAGSVVLAG CGGAAVSESK SSDEPIKIGV LLPYTGPFGL YGKPMEAALT ARLKLDDFKV GDRSIELVFE DEATDPATAV SKANKLVDQD GVSAVVCCAT GAATLAVGPI LAERGIPQLG PIPNPDGLSE FATAAVAAPT AGHDAGKLGT YAATDLDYRS AVIVASDFAY GHEVAENFKK GFTEAGGSIV KEVYAPLGTS DFASYLSQLP DADVVFAGFA GADAIRFVQQ YDKFGVKAKM PLIGHGPLVT ELVLNQIGPA AVGVGAAFYY SSTLDNAENE RFISTMKAAN PDFVPSHFTA GAWASGSVLL DAIERAGDDA TDGEKLAAAI RSTKIEAPWG PLAFDPDTGY AIAPTYYYTV ESSATGLSHK IVTEIP
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