Gene Noca_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0818 
Symbol 
ID4598825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp862466 
End bp863611 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID639775421 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_922030 
Protein GI119715065 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.372759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGGCT CGATCTACGA CTCGGAGCAC GAATCGTTCC GGGGGTCGGT GCGGCAGTTC 
CTGGCACGGG AGGTGTGGCC ACACGCCGAC GCTCATCGCA TCGCGGGAGG GTTCCCTCGC 
GAACTGTGGC TTGAGGCCGG ACGGCAGGGC TATCTCGGGC TATGCGTCCC CGAGTCCTAC 
GGTGGCGCGG ACGCCGATGA CTACCGCTTC AACGCCGTGC TCATCGAGGA GCTCGCGCGG 
GTCAACATGG CACTCGCCTC GTCGCTGAGC ATCCACTTCG ATGTGGTCGC GCCGTACCTG 
GTGGAGTTGA CGACGCCCGA ACAGCGCCAG CGGTGGTTGC CGGGGTTCGT CACCGGCGAG 
CTTGTCACAG CGATCGGGAT GACCGAGCCG TCAGTCGGCT CCGACCTGGC AGCCCTGCGC 
ACGACGGCGG AACCGTGCTC CGAGGGGTGG CGCCTGAACG GCAGCAAGAC CTTCATCACC 
AACGGCTCCT CCGCGGACCT CGTCGTGGTC GCGGCGCGAA CGACTCCCGG CAGCCGCTCG 
CGCGGCATCT CCCTATTCGC GGTGGAGGCT GACCGGCGCG GCTTCAGCAG AGGCCGCAAG 
CTGGACAAGG TCGGGCAGCC TGAGGCGGAC ACGGCCGAGC TCTTCTTCGA GGACCTCGTC 
CTCCCGGCGG AGAACCTGAT CGGCACGCTT GATCGGGGCT TCCAGCACAT GATGGGCGGC 
CTGACGCAGG AGCGGATCGG CGCCGCGACC TCCAACATCG CCCACGCTGC GCAGATCCTG 
GACGAGACGC TCGGCTACGT GCGCGAGCGC CGGGCCTTCG GGTCGCCGAT CGGCAGCTTC 
CAGCACAACA AGTTCCTGCT CGCCGAACTC GCAACCCGCG TCGAGGTGAC GCAGACCTTC 
GTCCATCAGT GCGTGCTGGC CCATAGTCGC GGTGAGCTCA CGCCCGTCGA CGCCGCCAAG 
GCCAAGTGGT GGAGCGCCGA CGTGCAGAAC GACGTGGTCG ACCACTGCGT TCAGCTGCAC 
GGCGGCTACG GCTTCATGAA CGAGCAGCGA GTGGCGCGGG CCTGGCAGGA CGCGCGGGTG 
ACCAAGATCT GGGCCGGTTC CAACGAGATC ATGAAGGAGT TGATCGGCCG TGACCTGGGC 
CTGTGA
 
Protein sequence
MLGSIYDSEH ESFRGSVRQF LAREVWPHAD AHRIAGGFPR ELWLEAGRQG YLGLCVPESY 
GGADADDYRF NAVLIEELAR VNMALASSLS IHFDVVAPYL VELTTPEQRQ RWLPGFVTGE 
LVTAIGMTEP SVGSDLAALR TTAEPCSEGW RLNGSKTFIT NGSSADLVVV AARTTPGSRS 
RGISLFAVEA DRRGFSRGRK LDKVGQPEAD TAELFFEDLV LPAENLIGTL DRGFQHMMGG 
LTQERIGAAT SNIAHAAQIL DETLGYVRER RAFGSPIGSF QHNKFLLAEL ATRVEVTQTF 
VHQCVLAHSR GELTPVDAAK AKWWSADVQN DVVDHCVQLH GGYGFMNEQR VARAWQDARV 
TKIWAGSNEI MKELIGRDLG L