Gene Noca_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0817 
Symbol 
ID4598824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp861721 
End bp862353 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID639775420 
ProductTetR family transcriptional regulator 
Protein accessionYP_922029 
Protein GI119715064 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.577348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGA CGACACGGAC ATCCGGATCG CCGACCCCAC GCGCTAACGC TCGCGGCGAG 
CGCGCCAGAC TGCGGCTCCT CGACGCGGCC CTGTCGGCCT TCGCGACACA GGGCTTCCAC 
GGGACGAGCA CACGTGACAT CGCCGAGGCC GCGGCGATGA GTCCGGCCGC GGTCTACGTC 
CACTACCGCA CCAAGGAGGA ACTGCTCTTC CAGCTGTCGC TTCACGGCCA CCGCGAGATC 
CGCCGTGTGG TGGAAACGGC ATTGGGCCGC CCCGAGCCGC CTGCCGCCCG ACTGCGAGGA 
CTCGTCGCCG ACTACACGGC CTGGCACGCC CGATCGCATG TGCAGGCGCG CGTGCTGCAG 
TACGAGTTCG CGGCACTCCT TCCGGAGCAC GCCGAGCAGA TCGCCGCGAT CCGCGGTGCC 
ATCGAGGCGA TGTTCCAAGG TGCCATCACC GACGGCGTGG ATGCGGGCAT CTTCCGCATC 
GACGACGTCA AGATGACCAG TCTCGCGCTC CTGTCGCTCG GGATCGACGT CGCCCGCTGG 
TTCCGCCCGG GCGGAGCTCG CTCGCCGGAC GAGATCGGCA ACTACTACGG AGAGATCGCG 
CTGCGGGTCT GCGGTCACCC CGGCGATCTC TGA
 
Protein sequence
MISTTRTSGS PTPRANARGE RARLRLLDAA LSAFATQGFH GTSTRDIAEA AAMSPAAVYV 
HYRTKEELLF QLSLHGHREI RRVVETALGR PEPPAARLRG LVADYTAWHA RSHVQARVLQ 
YEFAALLPEH AEQIAAIRGA IEAMFQGAIT DGVDAGIFRI DDVKMTSLAL LSLGIDVARW 
FRPGGARSPD EIGNYYGEIA LRVCGHPGDL