Gene Noca_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0772 
Symbol 
ID4598852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp815723 
End bp815974 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content73% 
IMG OID639775373 
Productcarbon storage regulator 
Protein accessionYP_921984 
Protein GI119715019 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTCT TGAGCCGTCG TGCCGGAGAG AGCGTGGTGC TCGGCGAGGA CGTCGTCGTG 
ACGATCCTCG AGGTCCGCGG CGACGTCGTC CGGGTCGGCA TCGACGCGCC CCGCTCGGTC
AGGGTGCACC GCGCCGAGCT GCTCGCCCAG CTCGAGGAGA CCAACCGCCA GGCCGCGTCC
CCCAGCGAGG ACGTGATCGC CAACCTGGCC CGCGCCCTCG ACCACGGCAC CGGCACCGAC
CCCTCCTCCT GA
 
Protein sequence
MLVLSRRAGE SVVLGEDVVV TILEVRGDVV RVGIDAPRSV RVHRAELLAQ LEETNRQAAS 
PSEDVIANLA RALDHGTGTD PSS