| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0759 |
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| Symbol | |
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| ID | 4599644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 804977 |
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| End bp | 806572 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639775360 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_921971 |
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| Protein GI | 119715006 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.853034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGA AGCTGAACCG CAGCCTCGCC AACCTGCGGA CCACGTTCAC CTCGTTCACC
CTCGGCCAGC AGGTCGTGTC CGTGATCGGT ACGGCGGCGA TCCTGCTCGC CGCGTTCATG
GTCTTCCGGT GGGTGTCCAC CCCGGACTAC GCACCGCTCT ACAGCAACCT GGCCGCGTCG
GACGCCTCGG CGATCGTCGA CGAGCTCGAC TCGCAGGGCA CGCCGTACAA GCTGGCCAAT
GGCGGCTCGA CCGTGATGGT GCCGCGCGAC TCCGTGTACG CGACCCGGAT CTCGCTCAGC
GGCCAGGGCC TCCCCGAGCA GAGCAGCGGC CAGGGCTACT CCCTGCTGGA CAACCAGGAC
ATCTCGACCT CGGAGTTCCA GGAGCAGACC GACTTCAAGC GCGCGATGGA GGGCGAGCTC
GCCTCGACCA TCGAGGCGGT CGACGGCGTC ACCACCGCCG TCGTCCACCT GGCGCTGCCG
CCGGCCAAGG TGTTCAGCGA CCAGCAGGAC CCGCCGACCG CCTCGGTGCT CATCGACACC
GCTGCCGGGA CCACGTTCAA CGCCGAGCAG GTCCAGGCGA TCGTGCACCT GGTCGCCTCG
AGCATCGACG GTCTCGACCC CGACAACGTG ACGGTCGCGG ACTCCTCCGG CAAGGTGCTC
TCCTCCAGCG ACGCCGGCGC CCTGGGTGCC AGCACGCGCG ACCAGCAGGT CACGAGCTTC
CAGCAGCAGA CCAGCCAGCG GATCCAGAGC ATGCTCGACC GGGTCCTCGG CCCGGGCAAC
TCGACCGTCC AGGTGACCGC AGACCTCGAC TTCGACAAGT CGGTCTCCGA GTCGACGACC
TACGGCAAGA GCAACAAGGT GCCGGCCCTG TCGTCGAGCA CGAGCACCGA GAAGTACGAC
GGTCCGGCCG GCGGCTCCAG CAGCAGCGGC GTGGTCGGCC CCGACGGGCA GATGGACAGC
TTCGGCGCGA CCGGCGCCGG CGGCAAGTCG TCCTACGTCA AGGAGTCGAC GACCTCGGAC
AACGCGGTCG AGAAGACCAT CGAGCACCGC GAGACGGCGC CCGGCAGCAT CAACACCCTC
CACGTGGGCG TGGTGCTCGA CACCACCGCC GCGCAGACCG TGAACCCCAC CGACGTGCAA
GACCTGATCG CGGCCACCGT CGGCATCAAC CCCGACCGCG GCGACACGGT GCAGGTCACG
ACGATGCCGT TCGACCGGAC CGCCGACAAG GCCGCCGCCG CGGAGCTCGC CGCCGCGACG
AAGGCCGCCA AGACCCAGCG GATGTGGGAC CTCGCCCGCA ACGCCGGCAT CGCGGTCGCG
ATCCTCGCGG TCCTGCTGAT CGCCTGGCTG CGCTCGCGCA AGAAGTCGAA GCGTCGCGAG
AAGACCACGA CCTACCTCGT CGAGCAGCTG CGCAACGACG CGGCCGAGCG CCAGGCCGCG
GCCGCGGTCG CGATCCAGAA CAGCCCCGCC CTCGAAGCCC TCGAGAGCGC CGACCGCGCC
GGCGACGAGA TGCGGCGTGA GCTCGCCGAT CTCGCCGACG GCCAGCCCGA GGACGTCGCC
GCCCTGCTGC GCGGCTGGCT GGTGGAGCGT CCCTGA
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| Protein sequence | MKQKLNRSLA NLRTTFTSFT LGQQVVSVIG TAAILLAAFM VFRWVSTPDY APLYSNLAAS
DASAIVDELD SQGTPYKLAN GGSTVMVPRD SVYATRISLS GQGLPEQSSG QGYSLLDNQD
ISTSEFQEQT DFKRAMEGEL ASTIEAVDGV TTAVVHLALP PAKVFSDQQD PPTASVLIDT
AAGTTFNAEQ VQAIVHLVAS SIDGLDPDNV TVADSSGKVL SSSDAGALGA STRDQQVTSF
QQQTSQRIQS MLDRVLGPGN STVQVTADLD FDKSVSESTT YGKSNKVPAL SSSTSTEKYD
GPAGGSSSSG VVGPDGQMDS FGATGAGGKS SYVKESTTSD NAVEKTIEHR ETAPGSINTL
HVGVVLDTTA AQTVNPTDVQ DLIAATVGIN PDRGDTVQVT TMPFDRTADK AAAAELAAAT
KAAKTQRMWD LARNAGIAVA ILAVLLIAWL RSRKKSKRRE KTTTYLVEQL RNDAAERQAA
AAVAIQNSPA LEALESADRA GDEMRRELAD LADGQPEDVA ALLRGWLVER P
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