Gene Noca_0737 details

Gene Information

• Locus tag: Noca_0737
• ID: 4599622
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 785150
• End bp: 787108
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639775338
• Product: ABC transporter related
• Protein accession: YP_921949
• Protein GI: 119714984
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA CGGGCTCGAC CGGCTCGCCC GGCAAGGGCA AGGTCTTCGA GGCGACCGAG 
CGGATCCAGG CGCCCCAGGG TGGGCCGGGT CGCGGTCCGA TGGGCGGCGG CATGGTCGGC 
CAGAAGGCGA TGAGCTTCGG GCCCTCCGCG CGGCGCCTGA TCGGGCGGAT GCGGCCCGAC 
CGCGCGCAGG CCGTCGTCGT GGTGCTGCTC GGGGTCGCCA GCGTTGCGCT GATGTCGAGC 
GGACCGCGGA TCCTCGGGCA CGCCACCGAC CTGGTCTTCG ACGGGTTCAT CGGCCGGCAG 
TTCCCGGCCG GCACCCCCGA CTCCACACTG CCCGACGCGG TGCAGGGTCG AGACGTCGTC 
CCCGGTCAGG GCATCGACTT CACCGCGGTC GGCCACGTGC TGCTCCTGGT GCTCGCGATC 
TACGCCGGCG CCTCGCTGCT CGGCTGGCTG CAGGGCTACG TGCTGAACAC CGTGGTGCAG 
AACACCGTGC GCCGGATGCG CCAGGACGTC GAGGACAAGA TCAACCGGCT GCCGCTGGGG 
TACTTCGACC GCTCGCCCCG GGGGGAGCTG CTGAGCCGGG TCACCAACGA CATCGACAAC 
GTCAGCCAGA CCCTGCAGCA GACGATGAGC CAGCTCCTCA CCTCGCTGAT GACGGTGGTC 
GCCGTGCTCG GCATGATGTT CTGGATCTCG CCGCTGCTCG CGTTGATCGC CCTCGTGTCG 
GTCCCGCTCT CGCTGGTGGC GACGGCGCAG ATCATGAGGC GATCACAGGG GCAGTTCGTG 
GCCCAGTGGC GACGTACCGG AGCACTCAAC GCGCAGATCG AGGAGGCGTT CTCCGGGCAC 
GCGCTGGTCA AGGTCTTCGG TCGCCGTGAG GAGATCGAGC GGACCTTCGC CGAGGAGAAC 
GAGAAGCTCT ACCAGGTCAG CTTCGGCGCC CAGTTCGTCA GCGGCCTGAT CATGCCGTCG 
ATGATGTTCA TCGGGAACCT CAACTACGTC GCGATCGCGG TGATCGGGGG ACTGCGGGTC 
GCCAGCGGCT CGTTGTCGCT GGGCGACGTG CAGGCGTTCA TCCAGTACAC CCGGCAGTTC 
ACGCAGCCGC TCACGACGGT GGCGTCGATG GCGAACCTGC TCCAGTCCGG CGTCGCGTCG 
GCGGAGCGCG TCTTCGAGCT GCTCGACGCC GACGAGGAGC CGCTGGACCC GGCCGCGCTG 
CGCACGCCGG CCGTCCGTCG TGGCGAGGTC GCCGTCGAGC GCGTCTCGTT CCGGTACGAC 
GAGGACCGCC CGCTGATCTC GGACCTCTCC CTGGTCGCCC GGCCGGGGCA GACCGTGGCG 
ATCGTCGGCC CGACCGGCGC CGGAAAGACG ACGCTCGTGA ACCTGGTGAT GCGGTTCTAC 
GACGTGGACG CCGGCCGGAT CACCCTGGAC GGCGTGGACA TCGCGGGGAT GCCCCGGTCG 
GTCCTCCGCG GGCAGATCGG GATGGTGCTC CAGGACACCT GGCTGTTCGA GGGCACGATC 
CGCGACAACA TCGCCTACGG ACGTCCGGAC GCGACCGACG AGCAGGTGCT CGAGGCGGCG 
CGCGCGACGT ACGTAGACCG CTTCGTGCAT GCGCTCCCCG ACGGCTACGA CACGGTCATC 
GACGAGGAGG GGTCGAACCT CTCGGCCGGC GAGCGTCAGC TCGTCACCAT CGCCCGGGCG 
TTCCTCACGG ACCCGGCCCT GCTGATCCTC GACGAGGCGA CCTCGTCGGT GGACACCCGC 
ACCGAGCTCC TGCTCCAGCA CGCGATGGCG GCGCTGCGCA CCGACCGCAC GTCGTTCGTG 
ATCGCGCACC GGCTCAGCAC GATCCGCGAC GCGGACCTGA TCCTGGTGAT GGAGGACGGG 
GCGATCGTCG AGCAGGGCAC CCACGACCAG CTGCTGACCG CCGCAGGAGC CTATGCCCGG 
CTCTACAACG CCCAGTTCCA AGCGGCCGAG GTCGGCTGA 

 

Protein sequence

MSETGSTGSP GKGKVFEATE RIQAPQGGPG RGPMGGGMVG QKAMSFGPSA RRLIGRMRPD 
RAQAVVVVLL GVASVALMSS GPRILGHATD LVFDGFIGRQ FPAGTPDSTL PDAVQGRDVV 
PGQGIDFTAV GHVLLLVLAI YAGASLLGWL QGYVLNTVVQ NTVRRMRQDV EDKINRLPLG 
YFDRSPRGEL LSRVTNDIDN VSQTLQQTMS QLLTSLMTVV AVLGMMFWIS PLLALIALVS 
VPLSLVATAQ IMRRSQGQFV AQWRRTGALN AQIEEAFSGH ALVKVFGRRE EIERTFAEEN 
EKLYQVSFGA QFVSGLIMPS MMFIGNLNYV AIAVIGGLRV ASGSLSLGDV QAFIQYTRQF 
TQPLTTVASM ANLLQSGVAS AERVFELLDA DEEPLDPAAL RTPAVRRGEV AVERVSFRYD 
EDRPLISDLS LVARPGQTVA IVGPTGAGKT TLVNLVMRFY DVDAGRITLD GVDIAGMPRS 
VLRGQIGMVL QDTWLFEGTI RDNIAYGRPD ATDEQVLEAA RATYVDRFVH ALPDGYDTVI 
DEEGSNLSAG ERQLVTIARA FLTDPALLIL DEATSSVDTR TELLLQHAMA ALRTDRTSFV 
IAHRLSTIRD ADLILVMEDG AIVEQGTHDQ LLTAAGAYAR LYNAQFQAAE VG