| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0712 |
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| Symbol | |
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| ID | 4599816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 753385 |
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| End bp | 757257 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639775313 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_921924 |
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| Protein GI | 119714959 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACG TGAACTTCTT CGACCAGCTT CAGATCGGCC TGGCCACCGC GGACGACATC
CGCACTTGGA GCCACGGTGA GGTCAAGAAG CCGGAGACCA TCAACTACCG CACGCTCAAG
CCCGAGCGTG ACGGCCTCTT CTGCGAGAAG ATCTTCGGTC CCACCCGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG GGTCCGGTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GGTCCAAGGT CCGCCGCGAG CGGATGGGCC ACATCGAGCT CGCCGCCCCG
GTCACCCACA TCTGGTACTT CAAGGGTGTC CCGAGCCGCC TGGGCTACCT GCTCGACCTC
GCCCCGAAGG ACCTGGAGAA GGTCATCTAC TTCGCGGCGT ACATGATCAC GGCCGTCGAC
GAGGACGCCC GCCACCGCGA CCTGTCCTCG CTCGAGGGCA AGGTCGGACT CGAGCGCGAG
CGCCTCGAGA AGCGCCGCGA CCAGTCCATC GACGACCGTG CGAAGAAGCT GGAGGAGGAC
CTGGCTGCCC TCGAGGCCGA GGGTGCCAAG GCCGACCAGC GGCGCAAGGT CAAGGACGGC
GCCGAGCGCG AGATGAAGCA GCTGCGCGAC CGTGCCCAGC GGGAGATCGA CCGCCTCGAC
GAGGTGTGGA ACACCTTCAA GTCGCTGAAG GTCCAAGACC TCATGGGCGA CGAGATGCTC
TACCGCGAGA TGAAGAACTG GTTCGGCAAG TACTTCGAGG GCCACATGGG CGCCACGGCG
ATCCAGAAGC GCCTGGAGAG CTTCGACATC GAGGCCGAGG TCGAGCTGCT GCGCGACACC
ATCGCCAACG GCAAGGGCCA GCGCAAGGTG CGGGCCCTCA AGCGGCTCAA GGTCGTCGAC
GCGTTCCGCA AGACCGGCAA CAAGCCGCAG GGCATGGTGC TCGACGCGGT CCCGGTCATC
CCGCCGGACC TGCGGCCGAT GGTCCAGCTC GACGGCGGCC GCTTCGCGAC CTCGGACCTG
AACGACCTGT ACCGCCGTGT CATCAACCGG AACAACCGGC TCAAGCGACT GCTCGACCTG
GGTGCTCCCG AGATCATCGT CAACAACGAG AAGCGGATGC TCCAGGAGGC CGTCGACTCG
CTGTTCGACA ACGGTCGCCG CGGTCGTCCC GTCACCGGCC CGGGCAACCG GCCGCTGAAG
TCGTTGTCCG ACATGCTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCCGGCCG TTCCGTGATC GTGTCCGGCC CGCAGCTGAA GCTGCACCAG
TGCGGCCTGC CCAAGCAGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTCGACCTGT CGCACGCGCA GAACATCAAG TCCGCGAAGC GGATGGTGGA GCGCGCCCGC
CCGGTCGTGT GGGACGTCCT CGAAGAGGTC ATCACCGAGC ACCCGGTGCT GCTCAACCGG
GCACCCACCC TGCACCGTCT CGGCATCCAG GCCTTCGAGC CGCAGCTGAT CGAGGGCAAG
GCCATCCAGA TCCACCCGCT GGTCTGCTCG GCGTTCAACG CGGACTTCGA CGGTGACCAG
ATGGCGGTGC ACCTGCCGCT GTCCGCGGAG GCCCAGGCCG AGGCCCGGAT CCTGATGCTG
TCGACGAACA ACATCCTCAA GCCGTCGGAC GGCCGCCCCG TGACCATGCC CACCCAGGAC
ATGATCATCG GCCTGTTCTT CCTCACCACC GACCGTGACG GTCAGCCGGG TGACGGCCGG
GCGTTCGCGT CGCCGGCCGA GGCGATCATG GCGTTCGACC GGGGTGAGAT CTCGCTGCAG
AGCAAGGTCA GGATCCGGTT CACCGACATC GTGCCGCCGC TCGAGCTGGG CGCCGACTGG
GAGCAGGGTC AGGCCGTCTC GCTGGAGACC ACTCTCGGCC GCGCGCTGTT CAACGAGACC
CTGCCCGCCG ACTACCCGTA CGTGAACTAC GAGGTCGGCA AGAAGGCGCT CGGCGCGATC
GTCAACGACC TGGCCGAGCG CTACACCAAG GTCGAGGTCG CGGCCTCCCT CGACGCGCTG
AAGGACACCG GCTTCCACTG GGCGACCCGC TCCGGCGTCA CGGTCTCGAT CGACGACGTG
ACGACCCCGG GTGACAAGGC CGACATCCTG TCGGGGTACG AGGCCCAGGC CGCCAAGGTC
CAGAAGCAGT TCGAGCGCGG CCTGGTCACC GACGAGGAGC GCCGCCAGGA GCTCATCGAG
ATCTGGACCC AGGCCTCCAA CGAGGTCGGC AAGGCGATGG AGGCGAACTT CGACCGCGCC
AACCCGATCT ACATGATGGT CGACTCGGGT GCCTCCGGGA ACATGAACCA GATCCGGCAG
GTCGCCGCGA TGCGTGGTCT CGTGGCGAAC CCGAAGGGCG AGATCATCCC GCGGCCGATC
AAGTCGAACT TCCGCGAGGG CCTGACCGTC CTGGAGTACT TCATCGCGAC CCACGGTGCC
CGCAAGGGTC TGGCCGACAC CGCGCTGCGG ACGGCCGACT CGGGCTACCT GACCCGTCGT
CTGGTGGACG TCTCCCAGGA CGTGATCATC CGCGAGGACG ACTGCGGCAC CGAGCGCGGC
CTGCCCAAGC GGATCGGCGA GCGCCGTGAG GACGGGACCG TGGTCAAGGC GGAGAACGCC
GAGACCGCGG CGTACGCCCG CACGTCGGCC GTCGACGTCG CGCACCCGGA GACCGGCGAG
GTGCTCGTCC GGGCCGGCGA GGACCTCGGC GACGTGAAGA TCGGCGAGCT GATCTCCGCG
GGCGTCGAGG AGGTCAAGGT CCGCTCCGTG CTGACCTGTG ACGCCAAGAC CGGCACCTGC
GCGAAGTGCT ACGGCCGGTC GCTGGCGACC GGCAAGCTCG TCGACATCGG TGAGGCCGTC
GGCATCATCG CGGCCCAGTC GATCGGCGAG CCCGGCACCC AGCTGACGAT GCGTACCTTC
CACACCGGTG GTGTGGCCTC GGCCGACGAC ATCACGCAGG GTCTGCCCCG TGTGGTCGAG
CTCTTCGAGG CCCGCTCGCC CAAGGGACGC TCGCCGATCT CCGAGGCCGC CGGCCGGGTG
ACGATCGAGG AGAGCGACAA GGCGCGCAAG GTGCTGATCA CCCCCGACGA CGGCTCCGAG
GTCCAGGAGT ACCCGGTCTC GAAGCGGTCC CGCCTCCTGG TGGGGGACGG TGACCACATC
GAGGTCGGCC AGATGCTCAC CGTCGGCACG CCCGACCCGC AGGACGTCCT GCGGATCCTG
GGGGTGCGGC GGGCGCAGGA GCACCTGGTG GACGAGGTCC AGGCCGTGTA CCGCTCGCAG
GGTGTGTCGA TCCACGACAA GCACATCGAG ATCATCGTGC GGCAGATGCT GCGCCGGATC
ACGGTGATCG AGTCCGGCGA CACCAACCTG CTCCCGTCCG ACCTGGTCGA CCGGGTGCGG
TTCGAGGAGG AGAACCGGCG CGTGGTCTCC GAGGGCGGCA AGCCGGCCTC GGGCCGTCCG
GTCCTGATGG GCATCACCAA GGCCTCGCTG GCGACGGAGT CGTGGCTCTC GGCGGCCTCC
TTCCAGGAGA CCACCCGGGT GCTCACCGAC GCCGCCATCC ACGGGCGCAG CGACTCGCTG
CGCGGCCTGA AGGAGAACGT GATCATCGGC AAGCTGATCC CGGCGGGCAC CGGCCTCGAG
CGGTACCGCA ACATCCGGGT GGAGCCCACC GAGGAGGCCC GCGCCGCGGC GTACTCCGTC
ACCGGCTACG ACTCCTACGA CTACGAGTTC GGCAACGGGA CCGGCCAGGC CGTCGCCCTG
GACGACTTCG ACTTTGGGTC CTATCAGAAT TAG
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| Protein sequence | MLDVNFFDQL QIGLATADDI RTWSHGEVKK PETINYRTLK PERDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRSKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKVIY FAAYMITAVD EDARHRDLSS LEGKVGLERE RLEKRRDQSI DDRAKKLEED
LAALEAEGAK ADQRRKVKDG AEREMKQLRD RAQREIDRLD EVWNTFKSLK VQDLMGDEML
YREMKNWFGK YFEGHMGATA IQKRLESFDI EAEVELLRDT IANGKGQRKV RALKRLKVVD
AFRKTGNKPQ GMVLDAVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDS LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VSGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLSHAQNIK SAKRMVERAR
PVVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLIEGK AIQIHPLVCS AFNADFDGDQ
MAVHLPLSAE AQAEARILML STNNILKPSD GRPVTMPTQD MIIGLFFLTT DRDGQPGDGR
AFASPAEAIM AFDRGEISLQ SKVRIRFTDI VPPLELGADW EQGQAVSLET TLGRALFNET
LPADYPYVNY EVGKKALGAI VNDLAERYTK VEVAASLDAL KDTGFHWATR SGVTVSIDDV
TTPGDKADIL SGYEAQAAKV QKQFERGLVT DEERRQELIE IWTQASNEVG KAMEANFDRA
NPIYMMVDSG ASGNMNQIRQ VAAMRGLVAN PKGEIIPRPI KSNFREGLTV LEYFIATHGA
RKGLADTALR TADSGYLTRR LVDVSQDVII REDDCGTERG LPKRIGERRE DGTVVKAENA
ETAAYARTSA VDVAHPETGE VLVRAGEDLG DVKIGELISA GVEEVKVRSV LTCDAKTGTC
AKCYGRSLAT GKLVDIGEAV GIIAAQSIGE PGTQLTMRTF HTGGVASADD ITQGLPRVVE
LFEARSPKGR SPISEAAGRV TIEESDKARK VLITPDDGSE VQEYPVSKRS RLLVGDGDHI
EVGQMLTVGT PDPQDVLRIL GVRRAQEHLV DEVQAVYRSQ GVSIHDKHIE IIVRQMLRRI
TVIESGDTNL LPSDLVDRVR FEEENRRVVS EGGKPASGRP VLMGITKASL ATESWLSAAS
FQETTRVLTD AAIHGRSDSL RGLKENVIIG KLIPAGTGLE RYRNIRVEPT EEARAAAYSV
TGYDSYDYEF GNGTGQAVAL DDFDFGSYQN
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