| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0708 |
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| Symbol | |
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| ID | 4599812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 746881 |
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| End bp | 748155 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639775309 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_921920 |
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| Protein GI | 119714955 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0372566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACTC GCCGCACCCG TCTGCAGCTG CTCGCCTTCG TCGCGATCAC GCTCCTCGGT
GTCAGCTTCG TCGGCGCCCG CTACGCGCGG CTCGACCGGA TCTTCTTCGA CGACCACTAC
ACCGTCGTCG CGCACTTCCA GGACTCCGGT GGCATCTTCA CCGGCGGCGA GGTGTCCTAC
CGCGGCGTCC AGATCGGTCG GGTGGGTCAG CTCGAGCTGA CCGACTCCGG CGTCGACGTC
TACCTCGACA TCGACAACGG CTGGGACGAG ATCCCCGCGG ACTCGCTCGC CGTCGTGGGC
AACCGCTCCG CCGTGGGCGA GCAGTACGTC GAGCTCCAGC CGCAGGAGGA CTCCGGGCCC
TACCTCGGCG AGGACTCCCA GATCGCGATG GCCGACACCC GGATCCCGAT CGCGACCCAG
AAGCTGCTCA CCGACATCTC CGACACGGTC GAGTCGGTCG ACAAGCAGGC GCTGGCCACG
ACCGTCCACG AGCTGGGCCA GGCCTTCGGC GGTACCGGCA CGGACCTCCA GCGCATCATC
GACACGGGCA ACGCCTTCAT CAACGAAGCC AACGACAACT TCGACGTGAC GACGGCGCTG
ATCCGTGACA GCAACACCGT GCTCACCAGC CAGCTCGACA AGGCGAGCGC GCTGCGCACC
TTCGCCCGCG AGCTGAGCCT GTTCAGCGGC TCGCTGGCCG GCTCCGACGC GGACCTGCGC
AAGGTCATCG ACAACGGCTC GGCCGCGGCG ACGCAGCTGC GCACGTTCCT CGAGGACAAC
GAGGTCGACC TGGGGGAGCT GTTCAACAAC CTGGTCACCA CCGGCGACGT CGTCGTCAAG
CACCTGCCCG GCATCGAGCA GATCCTGGCG ATCTACCCCT ACGTCGTCGA GGGCGGCTTC
ACGGTCGTGT CGAAGTCGCC GGACACCGGC CTGTACGACG CCCACTTCGG CATGATCATC
ACCGACAACC CCGTGTGCCA CCACGGCTAC GAGGGCACCG ACACCCGACC TCCGCAGGAC
GGCAGCAACC GGCCGATGAA CACCAAGGCG GGCTGCCGGG AGCCGGCGAC GATGAGCAAC
CCGCGCGGTC CGCAGAACCT CCCCCGGGCG GGCGCGGCCT ACCGCGCGCC GGTCGCGTCG
TACGACCCCG ACACCGGCAA GGTGCACTGG GGCGCGAAGA TCGACCCCGT GCTGGCCCCG
ACCGGTACGT TGGCCCCCCA AGCGTTCGGA GAGGAGTCGT GGAAGTGGCT GTTCCTCCAG
CCCCTGGTGC CGTGA
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| Protein sequence | MITRRTRLQL LAFVAITLLG VSFVGARYAR LDRIFFDDHY TVVAHFQDSG GIFTGGEVSY
RGVQIGRVGQ LELTDSGVDV YLDIDNGWDE IPADSLAVVG NRSAVGEQYV ELQPQEDSGP
YLGEDSQIAM ADTRIPIATQ KLLTDISDTV ESVDKQALAT TVHELGQAFG GTGTDLQRII
DTGNAFINEA NDNFDVTTAL IRDSNTVLTS QLDKASALRT FARELSLFSG SLAGSDADLR
KVIDNGSAAA TQLRTFLEDN EVDLGELFNN LVTTGDVVVK HLPGIEQILA IYPYVVEGGF
TVVSKSPDTG LYDAHFGMII TDNPVCHHGY EGTDTRPPQD GSNRPMNTKA GCREPATMSN
PRGPQNLPRA GAAYRAPVAS YDPDTGKVHW GAKIDPVLAP TGTLAPQAFG EESWKWLFLQ
PLVP
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