Gene Noca_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0707 
Symbol 
ID4599811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp745466 
End bp746884 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content69% 
IMG OID639775308 
Productvirulence factor Mce family protein 
Protein accessionYP_921919 
Protein GI119714954 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.953173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGGC CGCGGATGCT GCGCGCCGTC GTCGCCGCTG CGGCCGGAGC GGTGCTGCTG 
ACCGGGTGCC AGTTCGACGT CTACGCATTG CCGCTGCCCG GTGGCACCGA CGTCGGCGAC
AACCCGATCA CCGTCACCGC CGACTTCCGC GATGTGCTCG ACCTGGTCCC GAAGTCCACG
GTCAAGGTCG ACGACGTGAA CGTGGGCGAG GTGACCGACG TCGACCTCGT CGAGGGCCAT
GCCCAGGTGA CGATGAAGCT CCGCAACGAC GTCGACCTGC CCGACAACGC GATCGCCGAG
ATCCGGCAGA CCAGCCTGCT CGGCGAGAAG TTCGTCTCGC TCAGCCCGCC GACCGACACC
CCGGCCACAG GTGAGCTGGG CGACGGCGAC ACCATCGGTC TGGAGGACAC CGGCCGCAAC
CCGGAGGTCG AGGAGGTCCT CGGTGCGCTC AGCCTGGTCC TCAACGGCGG TGGTGTCGCC
CAGCTGAAGA CCATCGCCAC CGAGCTCAAC AAGGCGCTCG GCGGACGCGA GGACGCCGCC
CGGTCGGTCC TGACCCAGAT CAGCGACTTC ATGGCCCAGC TCGACGAGAA CAAGCAGGAC
ATCGTCAATG CCATCGACTC GCTGAACAAC CTGGCGGTCT CGGCCCGCGG GCAGCAGGAC
TCGATCGACG CCGCGCTCGA CGAGCTGCCG AGTGCGTTGA CCTCCCTGGA CCAGCAGCGC
GCCGACCTCG TCAAGATGCT GGGCGCCCTG AACCGGCTCG GTGGCGTGGG CGTCCGGGTC
ATCAACGCCT CGAAGGACGC CACGATCGAG TCGTTGCGCC AGCTGAACCC GGTGCTCACC
GAGCTGGCGA ACTCCGGCGA CGCGTTCGTG AAGTCGTTCA ACGTCTTCTT GACCTACCCG
TTCGTCGACG ACGTCGTCGG CCGCGACCCG CAGGTCGCGC GCAACCTGCA CATGGGCGAC
TACACCAACC TGTCGGTCGA GCTCGACATG GACCTCTCCG GCGGAGCCAG CGGCACCGCC
CTGCCGACCC TGCTGCCCAG CGACCTCGAT CCGACGGTCG TCCTCGGCCG GGTCGCCCGG
TGCATCCAGA GCGGGGACAT CAACAGCTTG CCGTGCCAGA GGCTGCTGAG CACCGTCGAG
GGTCTGGCGA AGCTGCGCGA CGCGTGCCTG AAGAAGAAGA ACGAGAAGAC CGTCGTCTGC
CGGATCGTCA ACCAGATCCC GGGGCTGCCC GAGGGCGGCC TCCCGACCGC CTTGCCGACC
AGCCTCCCGA GCCTCCCCGA CCTGACCGGG ATCCTCGGCC TGGGCCGGAC CGGCGTCGGC
CCGACGACCT CGGCGCCCGG CCCGACCCTG GGCCAGCTCA GCCGCCTGTT CGACCCGGCC
CTCGTCCGCC TCCTCGTCCC GGGGATGGTG ACCCGATGA
 
Protein sequence
MMRPRMLRAV VAAAAGAVLL TGCQFDVYAL PLPGGTDVGD NPITVTADFR DVLDLVPKST 
VKVDDVNVGE VTDVDLVEGH AQVTMKLRND VDLPDNAIAE IRQTSLLGEK FVSLSPPTDT
PATGELGDGD TIGLEDTGRN PEVEEVLGAL SLVLNGGGVA QLKTIATELN KALGGREDAA
RSVLTQISDF MAQLDENKQD IVNAIDSLNN LAVSARGQQD SIDAALDELP SALTSLDQQR
ADLVKMLGAL NRLGGVGVRV INASKDATIE SLRQLNPVLT ELANSGDAFV KSFNVFLTYP
FVDDVVGRDP QVARNLHMGD YTNLSVELDM DLSGGASGTA LPTLLPSDLD PTVVLGRVAR
CIQSGDINSL PCQRLLSTVE GLAKLRDACL KKKNEKTVVC RIVNQIPGLP EGGLPTALPT
SLPSLPDLTG ILGLGRTGVG PTTSAPGPTL GQLSRLFDPA LVRLLVPGMV TR