| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0704 |
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| Symbol | |
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| ID | 4599808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 742125 |
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| End bp | 743171 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639775305 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_921916 |
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| Protein GI | 119714951 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC TCGACCAGCG CACCAGCGCC GACCTCACCA AGCTGCTGAT CTTCATCGTG
GTGACGACGC TGGCCACCTC GGTGCTCGTC GCGACGATCG GCAACCTGAC CTTCTCCAGC
AAGCACGACT ACCGCGCCGA GTTCGTCGAC GCGACCGGCG TGGTGAAGGG CGACGACGTG
CGCATCGCCG GGGTGAAGGT CGGGACCGTG AAGAGCGTCG AGGTCGTCGA CCGCACCCGT
GCCCTGGTCA CCTTCGACGT CGACGACTCC GCCTCGATCA GCCAGGCCAC GCACGCGGCG
ATCCGCTACC GCAACCTCGT CGGCCAGCGC TACATCGCAC TCACCGACGA GATCGGCGAC
GTCGCCCCGC TGCCCGCGGG CGGGACGATC CCGGTCTCGC AGACCTCGCC GGCCCTCGAC
CTGACCGTCC TGTTCAACGG CTTCAAGCCG CTGTTCCAGG CGCTTTCGCC GGCCGACCTC
AACCAGCTCT CGTACGAGAT CGTCCAGGTC TTCCAGGGGG AGGGCGGGAC CCTCGAGGGA
CTGCTCGCGC ACACCGCCTC GGTGACCTCG ACCCTGGCCA GCCGCGACCA GCTGATCGGT
GACCTGATCG ACAACCTCAA CGAGGTGCTC GACCACATCG GCGACCGCGA CGTCCAGCTG
AGCCGGCTGA TCACCACGTT CCGCACCTTC GTGGGCGGAC TCAAGGACGA CCGCCAGGCC
ATCCTCGGCT CCCTGGACCA GATCTCCGAG CTCTCGGTGC AGACCGCCGG ACTGGTCGAC
GGCATCCGTG AGCCGTTCGT CAGCGACATC CACCAGCTCC GCGAGGTCGC CCGCAACCTC
GACAACGGCA AGGCCGAGCT GGACCGGGCC CTGCAGGTGC TGCCCATCAA GCTCAACAAG
GTCGGCCGGA CCGCGACCTA CGGGTCCTGG TTCAACTTCT ACCTGTGCCA CTTCCAGGGT
CGGATCCGCC TCCCGGGCGG ACAGTCGGTG CCCGTCGACT ACCCACCCAA CGGCGTCAAG
GTCGCAGACA GGTGTGATCT CGGATGA
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| Protein sequence | MKMLDQRTSA DLTKLLIFIV VTTLATSVLV ATIGNLTFSS KHDYRAEFVD ATGVVKGDDV
RIAGVKVGTV KSVEVVDRTR ALVTFDVDDS ASISQATHAA IRYRNLVGQR YIALTDEIGD
VAPLPAGGTI PVSQTSPALD LTVLFNGFKP LFQALSPADL NQLSYEIVQV FQGEGGTLEG
LLAHTASVTS TLASRDQLIG DLIDNLNEVL DHIGDRDVQL SRLITTFRTF VGGLKDDRQA
ILGSLDQISE LSVQTAGLVD GIREPFVSDI HQLREVARNL DNGKAELDRA LQVLPIKLNK
VGRTATYGSW FNFYLCHFQG RIRLPGGQSV PVDYPPNGVK VADRCDLG
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