Gene Noca_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0700 
Symbol 
ID4599804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp738218 
End bp739219 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID639775301 
ProductABC transporter related 
Protein accessionYP_921912 
Protein GI119714947 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGGG GGAGCGCGCG CGGTGCCGAT GGAGGGACGA AGGCGGTCAT GGGCGTTGAG 
ATTCAGGTCG AGCACCTGAG CAAGTCGTTC GGCAAGCAGC TCATCTGGGG CGACGTCACG
CTGACCGTCC CCGCCGGCGA GATCTGCGTG ATGCTGGGCC CCTCCGGGAC CGGCAAGTCG
GTCTTCCTCA AGACCCTCAT CGGGCTGCTG AAGCCCGACC AGGGCTCGAT CGTGATCGAG
GGCACCGACA TCGCCACCTG CTCCGAGAAG GAGCTCTACG AGATCCGCAA GCTGTTCGGC
GTGCTGTTCC AGGACGGCGC CATGTTCGGC TCGATGAACC TCTACGACAA CGTCGCGTTC
CCGCTGCGTG AGCACACCAA GAAGTCCGAG TCCGAGATCC GCGACATCGT CATGGAGAAG
ATGGACCTGG TCGGCCTGGT CGGTGCCGAG GACAAGCTCC CCGGCGAGAT CTCCGGCGGC
ATGCGCAAGC GCGCCGGCCT GGCCCGGGCG CTGGTGCTCG ACCCCGAGAT CGTGCTCTTC
GACGAGCCCG ACTCCGGCCT CGACCCGGTC CGTACGTCGT TCCTCAACCA GCTGATCGTC
GACCTCAACG CGCAGATCGA CGCCACCTTC CTGATCGTCA CCCACGACAT CAACACCGCC
CGGAAGGTGC CCGACAACAT CGGGCTGCTC TACCACCGGC ACCTGGCGAT GTTCGGCCCC
CGCGAGATGC TGCTGTCCTC GGAGGAGCCG GTCGTGCGTC AGTTCCTCAA CGCCCAGCGG
GTCGGCCCGA TCGGCATGTC CGAGGAGAAG GACGCCGACG AGCTGGAGGC CGAGAAGGAC
CAGGAGCTGC CGCCGCTGCC GCCGATCCCG CTGCAGCTCG AGCCCTCCAA CGGCATCCCC
CGGCGCAGCC AGCGGCCCCC GGGTGAGTGG TGCCGGGAGC ACGGCGTGAC CCCGCCGCCG
GGCTCGTTCG AGGAGAACAT GTCGATGGCG ACGGGCGGCT GA
 
Protein sequence
MDRGSARGAD GGTKAVMGVE IQVEHLSKSF GKQLIWGDVT LTVPAGEICV MLGPSGTGKS 
VFLKTLIGLL KPDQGSIVIE GTDIATCSEK ELYEIRKLFG VLFQDGAMFG SMNLYDNVAF
PLREHTKKSE SEIRDIVMEK MDLVGLVGAE DKLPGEISGG MRKRAGLARA LVLDPEIVLF
DEPDSGLDPV RTSFLNQLIV DLNAQIDATF LIVTHDINTA RKVPDNIGLL YHRHLAMFGP
REMLLSSEEP VVRQFLNAQR VGPIGMSEEK DADELEAEKD QELPPLPPIP LQLEPSNGIP
RRSQRPPGEW CREHGVTPPP GSFEENMSMA TGG