Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0680 |
Symbol | |
ID | 4597544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 720263 |
End bp | 721294 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639775281 |
Product | inner-membrane translocator |
Protein accession | YP_921893 |
Protein GI | 119714928 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACAT CGTCGAAGAT CCGCACCGAC CTCGCGGTCG ATCCGACCGC CACCGGTGAC GACCGCGCGA GCAGCGGCTC GGGTGGTGGC GATCTCGCCA CCCACTTGCA GCGGTACGCG CTGCTCCTCG CCCTGGTCGC GCTGATCGCC GTGTTCTCCG TCCTTCGGAC CGAGACCTTC TTCACCGTCG CCAACCTCAC CACGATCCTG AGCATCCAGG CGACCGCCGC CATGCTCGCG ATGGGCGTCA CGCTGGTGCT CATCATCGGA GAGTTCGACC TCTCCGTCGC CGCGGTCATG GGGTTGTCGG CAAGCCTGAT CGCCTACCTG ACCACCGAGC ACGGCGTCTC GGTGCCCCTG GCCTGCCTGG TCGCACTGGC GCTGGCCGCG ATCGTCGGCC TCGTCAACGC GGCGCTGGTC GTCGGCGCGG GACTCAACTC GTTCATCGTC ACCCTCGCGG TCGGGACCCT GGTCCAGGGG CTGGCCATCG GTGTCGCCGG CTCCGTGACC ATCGGCGGCC TCCCGACGTC GTTGACCTAC CCCTTCCAGA GCCGGTTCCT CGACGTCCAG GCGGCGTTCT TCTTCATGCT CGCCGTGGCC TTCGTCCTCT ACCTCGTGGT GGGCCGGATG CCGATCGGGC GGAGCATGTT CTTCACCGGC AATGCTCGGG CCGCCGCCGA GCTCGCCGGG GTCCGCACCG CCCGGGTACG CGTCGGGGTG ATGATGACCG CGGGACTGCT CGCCGGTGCC GCGGGCGTCA TGTTCGTGGG GCAGACCGGC GCCGCCAGCC CGTCGATCGC CGACCCGTTC CTGCTGCCCG CCTACGCCGC TGGGTTCCTC GGCGCTACTG CGTTCACCCC CGGTCGGTTC AACGTCTGGG GGTCGGTGTG GGCGGTCTAC CTGCTCGCCG TCGGTACCAC CGGCTTCCAG TTCCTCGGAC TCGACAACTG GGTGATCAAT GTCTTCAACG GCGGCGTTCT GGTCCTCGCC GTCGGCCTCA GTCGCTTCTT CGCCCGCAAG GCCCGCACCT GA
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Protein sequence | MTTSSKIRTD LAVDPTATGD DRASSGSGGG DLATHLQRYA LLLALVALIA VFSVLRTETF FTVANLTTIL SIQATAAMLA MGVTLVLIIG EFDLSVAAVM GLSASLIAYL TTEHGVSVPL ACLVALALAA IVGLVNAALV VGAGLNSFIV TLAVGTLVQG LAIGVAGSVT IGGLPTSLTY PFQSRFLDVQ AAFFFMLAVA FVLYLVVGRM PIGRSMFFTG NARAAAELAG VRTARVRVGV MMTAGLLAGA AGVMFVGQTG AASPSIADPF LLPAYAAGFL GATAFTPGRF NVWGSVWAVY LLAVGTTGFQ FLGLDNWVIN VFNGGVLVLA VGLSRFFARK ART
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