Gene Noca_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0680 
Symbol 
ID4597544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp720263 
End bp721294 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID639775281 
Productinner-membrane translocator 
Protein accessionYP_921893 
Protein GI119714928 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACAT CGTCGAAGAT CCGCACCGAC CTCGCGGTCG ATCCGACCGC CACCGGTGAC 
GACCGCGCGA GCAGCGGCTC GGGTGGTGGC GATCTCGCCA CCCACTTGCA GCGGTACGCG
CTGCTCCTCG CCCTGGTCGC GCTGATCGCC GTGTTCTCCG TCCTTCGGAC CGAGACCTTC
TTCACCGTCG CCAACCTCAC CACGATCCTG AGCATCCAGG CGACCGCCGC CATGCTCGCG
ATGGGCGTCA CGCTGGTGCT CATCATCGGA GAGTTCGACC TCTCCGTCGC CGCGGTCATG
GGGTTGTCGG CAAGCCTGAT CGCCTACCTG ACCACCGAGC ACGGCGTCTC GGTGCCCCTG
GCCTGCCTGG TCGCACTGGC GCTGGCCGCG ATCGTCGGCC TCGTCAACGC GGCGCTGGTC
GTCGGCGCGG GACTCAACTC GTTCATCGTC ACCCTCGCGG TCGGGACCCT GGTCCAGGGG
CTGGCCATCG GTGTCGCCGG CTCCGTGACC ATCGGCGGCC TCCCGACGTC GTTGACCTAC
CCCTTCCAGA GCCGGTTCCT CGACGTCCAG GCGGCGTTCT TCTTCATGCT CGCCGTGGCC
TTCGTCCTCT ACCTCGTGGT GGGCCGGATG CCGATCGGGC GGAGCATGTT CTTCACCGGC
AATGCTCGGG CCGCCGCCGA GCTCGCCGGG GTCCGCACCG CCCGGGTACG CGTCGGGGTG
ATGATGACCG CGGGACTGCT CGCCGGTGCC GCGGGCGTCA TGTTCGTGGG GCAGACCGGC
GCCGCCAGCC CGTCGATCGC CGACCCGTTC CTGCTGCCCG CCTACGCCGC TGGGTTCCTC
GGCGCTACTG CGTTCACCCC CGGTCGGTTC AACGTCTGGG GGTCGGTGTG GGCGGTCTAC
CTGCTCGCCG TCGGTACCAC CGGCTTCCAG TTCCTCGGAC TCGACAACTG GGTGATCAAT
GTCTTCAACG GCGGCGTTCT GGTCCTCGCC GTCGGCCTCA GTCGCTTCTT CGCCCGCAAG
GCCCGCACCT GA
 
Protein sequence
MTTSSKIRTD LAVDPTATGD DRASSGSGGG DLATHLQRYA LLLALVALIA VFSVLRTETF 
FTVANLTTIL SIQATAAMLA MGVTLVLIIG EFDLSVAAVM GLSASLIAYL TTEHGVSVPL
ACLVALALAA IVGLVNAALV VGAGLNSFIV TLAVGTLVQG LAIGVAGSVT IGGLPTSLTY
PFQSRFLDVQ AAFFFMLAVA FVLYLVVGRM PIGRSMFFTG NARAAAELAG VRTARVRVGV
MMTAGLLAGA AGVMFVGQTG AASPSIADPF LLPAYAAGFL GATAFTPGRF NVWGSVWAVY
LLAVGTTGFQ FLGLDNWVIN VFNGGVLVLA VGLSRFFARK ART