Gene Noca_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0676 
Symbol 
ID4599541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp715651 
End bp716163 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content71% 
IMG OID639775277 
Producthypothetical protein 
Protein accessionYP_921889 
Protein GI119714924 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.60111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACGTC TCTCCCGGCG CGGCCGCGAG CTGCCGTGCT TCGGGACGAC CGGGCACTTC 
CACGCCGCCC AGGTCCGTCT GGACCGGAGC GAACGGCTCG ACGGCCCGCC GGACCTGACG 
ACCGAGCGGA TCGCCGCCGG CGTCGGACAC GGGCAACGCG TGGTCGTCGC CGACGGGACG 
GTGCTGTCAT TGTCATTCGA CCCGCTGGGT GTCTACCGCC TGCTTGCCCT GATCGACGAC 
CCGACGGAGC CCTCGGCGTT CGCCGCCGAG GCGCTCGGGC CGTCGGCCAC CGCTCCATCG 
CCCGAGCACG ACAATCTCCA CCGGACACTC AGGGTGCTCC TGGACACCGG GATGAGCGTG 
GCCGAGAGCG CGCGCCTGCT GCACTTCCGC TACAACACCT TGCGCTACCG GATCACCCGC 
ATCGAGTCGC TCGTGGGTCC GTTCACCGCC GACGCTCAGC TCCGGCTGCG GATCCTCCTG 
GCCCTCCAGG TGCTGGACAT GCGCGGGGTA TGA
 
Protein sequence
MGRLSRRGRE LPCFGTTGHF HAAQVRLDRS ERLDGPPDLT TERIAAGVGH GQRVVVADGT 
VLSLSFDPLG VYRLLALIDD PTEPSAFAAE ALGPSATAPS PEHDNLHRTL RVLLDTGMSV 
AESARLLHFR YNTLRYRITR IESLVGPFTA DAQLRLRILL ALQVLDMRGV