| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0657 |
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| Symbol | |
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| ID | 4599520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 696778 |
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| End bp | 697992 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639775256 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_921870 |
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| Protein GI | 119714905 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCACT ACCGACGGAT CGGTGCGGTC CCGCCGAAGC GGCACACGCA GGCCCGCGAC
CCCGACGGCC GGCTCTACTA CGAGGAGCTG ATGGGCGAGG AGGGATTCTC CTCGGACTCG
TCGCTGCTCT ACCACCGCGG CGTGCCCTCC GCCATCGTCG CCGCGGAGCC GTGGGAGCTC
CCGGACCAGA GCCGCACGCC CAACCACCCG CTCAAGCCGC GGCACCTGCG GCTCCACGAC
CTCGAGACCG GCGGCGACGC CGTGACCAGC CGTCGGCTCG TGCTCGCCAA CGCCGACGTG
CGGATCTCCT ACGTGGTCGC CGGGTCCGAG CCCTCCGCCT ACTACCGCAA CGCGATCGGC
GACGAGTGCG TGTACGTCGA GTCCGGGGCC GGCGTGGTCG AGACCGTGTT CGGCGTGGTG
GGCTACCGCG CCGGCGACTA CGTCGTGATC CCGCGCGCGA CCACGCACCG GTGGGTGCCG
GCCCCTGGGT CCGAGGACCC GAGCCGGCTC TACGCGATCG AGGCGAACAG CCACATCGCC
CCGCCCAAGC GCTACCTGTC CCGCTACGGC CAGCTGCTCG AGCACGCGCC GTACTGCGAG
CGGGACCTGT ACGGCCCGAC CCAGCCGTTC ACGGCCGACG GCGGCGACGT CGACGTCCTC
GTCAAGCACC GGACCGGCGG CGGGATCGTC GGGACCCGGA TGACCTACGC GACGCACCCC
TTCGACGTGG TCGGTTGGGA CGGCTGCCTG TACCCCTACA CGCTCAACAT CGAGGACTAC
ATGCCGATCA CCGGCAAGGT GCACCAGCCG CCACCGGTGC ACCAGGTCTT CGAGGGGCAC
AACTTCGTGG TCTGCAACTT CCTGCCGCGC AAGGTCGACT ACCACCCGCT CGCGATCCCG
GTGCCGTACT ACCACTCCAA CGTCGACAGC GACGAGGTGA TGTTCTACGT CGGCGGCGAC
TACGAGGCGC GCAAGGGCTC CGGCATCCGC ATCGGGTCGA TCTCGCTGCA CCCCGGCGGA
CACGCCCACG GGCCGCAGCC CTCGGCGATC GAGGCCTCGC TCGGGGTGGA GTACTTCGAG
GAGTCGGCGG TCATGGTCGA CACCTTCGCC CCCCTCGACC TCGGCGAGGC GGGCCTCGCG
GTCGAGGACC CGGCGTACGC GTGGAGCTGG GCCGGGCGGG GGCCCGAGGA CCCGCCGGTC
TTCTCCAACT CGTGA
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| Protein sequence | MAHYRRIGAV PPKRHTQARD PDGRLYYEEL MGEEGFSSDS SLLYHRGVPS AIVAAEPWEL
PDQSRTPNHP LKPRHLRLHD LETGGDAVTS RRLVLANADV RISYVVAGSE PSAYYRNAIG
DECVYVESGA GVVETVFGVV GYRAGDYVVI PRATTHRWVP APGSEDPSRL YAIEANSHIA
PPKRYLSRYG QLLEHAPYCE RDLYGPTQPF TADGGDVDVL VKHRTGGGIV GTRMTYATHP
FDVVGWDGCL YPYTLNIEDY MPITGKVHQP PPVHQVFEGH NFVVCNFLPR KVDYHPLAIP
VPYYHSNVDS DEVMFYVGGD YEARKGSGIR IGSISLHPGG HAHGPQPSAI EASLGVEYFE
ESAVMVDTFA PLDLGEAGLA VEDPAYAWSW AGRGPEDPPV FSNS
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