| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0645 |
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| Symbol | |
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| ID | 4596062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 684225 |
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| End bp | 685583 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639775244 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_921858 |
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| Protein GI | 119714893 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTG TATCCGACGA GAAGCCCAGC AAGTTGTCCG CCGTTCACCA GCAGCGCCTG
CTGCGCACCG AGCTTCCCGG GCCGGCGTCG CGCCGGCTGA TGGCGCGCAA GTCCGCCGCT
GTCGCGCAAG GCGTCGGCAC GACGATGCCG GTCTTTGCGG CCAACGCCGA CGGCGGCGTC
GTGGTCGACG TCGACGGGAA CCAGTTCATC GACCTCGGCT CGGGCATCGC TGTCACGTCG
GTTGGCGCCA GTGCCTCACG CGTGGTCGCC GCCGTGCAGG AGCAGGTTGC CGCTTTTACC
CACACCTGCT TCATGGTTAC CCCCTACGCG GGCTACGTCA GCGTCGCCGA GGCGCTGAAT
CGGCTCACCC CCGGCGGCCA CGAGAAGCGC ACCGCGCTGT TCAACTCCGG CGCCGAGGCC
GTCGAGAACG CCGTGAAGAT CGCGCGCTCA CACACCGGCC GCCAGGCGGT CGTCGTCTTT
GACCACGCCT ACCATGGTCG GACCAACCTG ACGATGGCGA TGACTGCGAA GAACATGCCA
TACAAGCACG GCTTCGGTCC GTTCGCCGGC GAGGTCTACC GCGCGCCCCT TTCCTACCCC
TATCGCGACG GCGGCGTCGG TGGTGCAACG GCTGCGGCCC GGGCCATCGA TGTGATCGAG
AAGCAGGTCG GCACCGCCAA TTTGGCCGCT GTAGTGATCG AGCCGATCCA AGGCGAGGGC
GGGTTCATCG AGCCTGCTGC GGGCTTTCTG CCGGCCCTTG TGGCCTGGTG CCGCGCGAAC
GCGGCCGTCT TCGTGGCTGA CGAGGTGCAG ACCGGCTTCG CCCGTACCGG CGACTGGTTC
GCGTGCGACC GTGAAGGCGT CGTTCCCGAT CTCATCGTCA CAGCCAAGGG CATCGCCGGC
GGCCTGCCGC TCTCAGCGGT CACCGGCCGT GCGGAGATGA TGGACGCCGC CCACGTTGGT
GGTCTCGGCG GCACCTACGG CGGCAATCCG ATCGCCTGCG CGGCCGCGCT CGCGTCGATC
GAGACCATCG AGGCCGAGGG CTTGGTCGCC CGGGCCCGCG AGATCGAAGG GCTCCTCCTC
GGCCGGCTCC GTGCCATCGA GGCCCGCGAC TCCCGGATCG GGAACGTCCG CGGTCGTGGC
GCCATGATTG CCGTCGAGTT GGTCCGGGCC GGCACCGATG AGCCGGACCC CGAGCTCGCC
AAGGCCGTTG CCGCCGCGGC GCACCGGCAG GGCGTCATCG TCCTGACATG CGGCACGTAC
GGCAATGTGC TCCGCTTCTT GCCGCCGCTC TCGATCTCCG ACGACCTTCT AAACGATGCC
TTCGACGTGC TCGCCGCGAC TTTCGAGGTG ACGAAGTGA
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| Protein sequence | MTAVSDEKPS KLSAVHQQRL LRTELPGPAS RRLMARKSAA VAQGVGTTMP VFAANADGGV
VVDVDGNQFI DLGSGIAVTS VGASASRVVA AVQEQVAAFT HTCFMVTPYA GYVSVAEALN
RLTPGGHEKR TALFNSGAEA VENAVKIARS HTGRQAVVVF DHAYHGRTNL TMAMTAKNMP
YKHGFGPFAG EVYRAPLSYP YRDGGVGGAT AAARAIDVIE KQVGTANLAA VVIEPIQGEG
GFIEPAAGFL PALVAWCRAN AAVFVADEVQ TGFARTGDWF ACDREGVVPD LIVTAKGIAG
GLPLSAVTGR AEMMDAAHVG GLGGTYGGNP IACAAALASI ETIEAEGLVA RAREIEGLLL
GRLRAIEARD SRIGNVRGRG AMIAVELVRA GTDEPDPELA KAVAAAAHRQ GVIVLTCGTY
GNVLRFLPPL SISDDLLNDA FDVLAATFEV TK
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