Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0642 |
Symbol | |
ID | 4596059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 679574 |
End bp | 682021 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639775241 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_921855 |
Protein GI | 119714890 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAGAGC AGCAACAGCC GGCGCGCGCG CAGGTCGTCA TCGTGGGTGG CGGCATCATT GGGACGAGCA CTGCGTATCA CCTGGCTTGC CGTGGTTGGA CGGACGTTGT ACTGCTTGAG CGCAACACCC TGACTTCGGG CACGACTTGG CACGCGGCAG GGCTCGTGAC CCAGGCGCGA GGGACATGGG GGACCCGCGA AGTCGTTCAG CGAAGTCTCG ACGTGTTCCG CAACCTCGAA CACGACACCG GCTTCTCTAC CGGTTTCGTA AAGACCGGGA CGATGAACCT CGCCACGTCC GCTGACCGGT TCGATGAGAT GCGCCAGCTT GCAAGCGTCG TCCGCGGGAA CGGTATCGAT GCTGACCTTC TAGACGTCGA CCGCACGCTC GAACTCCACC CGCTCCTCAA CAGCGATGGT CTCTACGGCA GCCTCTACTT CCCTGAGGAC GGTCGCGGTA GCGCCACCGA CACGACGATC GCGCTGGCGC GCGGTGCGAC TAGTCGCGGC GTGCGAATCA TCGAGAACGT CGCTGTCGCC GGCGTCATGA CAGCTGGCGA CCGTGTTCGC GGAGTGCGTA CGACAGCGGG GGACATCGAG GCCGAGTACG TGGTGAACGC GACCGGCATG TGGGGCCGCG AGTTCGGGGA GATCGCAGGG GTCGACGTCC CCCTCCAAGC ACTGGCCCAT TACTACGTTG TAACTGAGGC CATCAAGGAC CTGCCACGGA ACCTCCCAAC CATCAAGAGC GGCGACGAGT ACTCGTACGT CAAGGACGAG GCAGGCGCAC TCATGGTGGG CTTTTTTGAG CCTGGAAGCT ACGCATGGGC GTCGAGGGGC ATCCCCGAGA GCGACGGCTA CATCCGACTT CCCGAGGACT GGGACCACCT CGGTGACTTC TACGAAAGGA TGATGTATCG AGTCCCGGTC CTCGCCGATG CCGGCATACG CTTGCACTTC TGCGGCCCCG AAAGCTTCAC CCCGGACGGC CAGTACCACC TGGGCGAGGC GCCTAACCTG CGCAACTATT TCGTAGCTGC CGGCTTCAAT TCCGTCGGGT TCCTTTCCGG GCCTGGCGCC GGATCTGTTC TCGCTGACTG GATCGTTGAC GGATACAGTC CCGTCGACCT CCCAGAGACC GACCTCGGAC GGGTCCAAAC CCACGAGACC AACCGCAGAT TCCTCGAAGA GCGAGTCGTT GAGTCACTTG ATATCTCTTA CGAGATCCAC TGGCCCTTCC AGCAGCGAGA ATCCGCCCGC CAACTACGAG TGAGCCCGTT GTACGAACGA ACCGACGCGG CCGGCGCGGT ATTCGGAGAG CTCGCCGGCT GGGAGCGCGC CAACTGGTAC GCCCCCGCAG GCGTCGTGCG CCGCTACGAG TACTCCTTCG GACGCCCGAA CTGGTTCGAG CACTCGGCGG CCGAGCACAA CGCCATTCGC GAAGCCGTCG GAATGATCGA CACCTCGTCC TTCGGCAAGC TCCTGGTTCA AGGACGCGAC GCTGTGAGTG TGCTGAACCG ACTCTCGGTG AACCAGGTCG ACGTGCCGAT CGGACGCATC GTCTACACCC AGTGGCTCAA CGACAACGCG GGCATCGAAG CCGACGTGAC CATCACCCGG GTCGGCGAAA CTGAGTTTCT CGTCCTGTCC GGCCCAGCAA CCATCAACCG AGACCTCGCT CATCTCCGAC GGCACATCGG TGACCAGTTC TGCACCGTCG CCGATGTCAC AGGGACCATG GCCATGCTTG CCGTCATGGG CCCGAATGCC CGTGACCTCC TCGGCCCGCT CACCGATGCA GACTTGTCGA CCGAGGCGTT CCCCTTTGGG ACGTCTCGGC AGATCGACCT CGGCTTGACC CACGTCAGGG CTACTCGCGT GACTTACGTG GGCGAACTGG GATGGGAACT CCTGATCCCG TCCGAGAGTG CAAGGCACAT CTGGGACACG ATCATGGACG CCGGCGAGCC GCACGGTCTC CGCAACGTCG GTTATCACGC GATGAACTCG TTGCGGCTAG AGAAGGCCTA TCGAAGCTGG GGGCATGACA TCTCCGCAGG CGACAACCCG ATCCAGGCGG GCCTCTCATT CACTGTCAAG TGGGACAAGT CGTCGGGATT CGTCGGCCGC GAAGCGCTGG AGAAGGTGAA GAGTGAGGGC GTCGCACGGC GTCTCGTGCA GTTCGTCCTG GAGGATCCGG AACCGCTCCT CTTCCACGAC GAACCCATCT ATCGCTTCGG CGAGTTGGTC GGACGCGTCG CATCCACCCA GTACGGCCAC ACCCTCGGCG GGGCTGTTGC GCTTGGCTGG GTCGAAGCGT CTGAGGTTGT ACCGCGCACC TGGTTCGAGT CCGAGCCGTA CGAGATCGAG GTAGGCGGCC GGCGCGTCCC CGCTCGAGCT TCCTTGAGTC CCATGTATGA CCCGAAGTCC GAAAGGCCCA AGCAGTGA
|
Protein sequence | MGEQQQPARA QVVIVGGGII GTSTAYHLAC RGWTDVVLLE RNTLTSGTTW HAAGLVTQAR GTWGTREVVQ RSLDVFRNLE HDTGFSTGFV KTGTMNLATS ADRFDEMRQL ASVVRGNGID ADLLDVDRTL ELHPLLNSDG LYGSLYFPED GRGSATDTTI ALARGATSRG VRIIENVAVA GVMTAGDRVR GVRTTAGDIE AEYVVNATGM WGREFGEIAG VDVPLQALAH YYVVTEAIKD LPRNLPTIKS GDEYSYVKDE AGALMVGFFE PGSYAWASRG IPESDGYIRL PEDWDHLGDF YERMMYRVPV LADAGIRLHF CGPESFTPDG QYHLGEAPNL RNYFVAAGFN SVGFLSGPGA GSVLADWIVD GYSPVDLPET DLGRVQTHET NRRFLEERVV ESLDISYEIH WPFQQRESAR QLRVSPLYER TDAAGAVFGE LAGWERANWY APAGVVRRYE YSFGRPNWFE HSAAEHNAIR EAVGMIDTSS FGKLLVQGRD AVSVLNRLSV NQVDVPIGRI VYTQWLNDNA GIEADVTITR VGETEFLVLS GPATINRDLA HLRRHIGDQF CTVADVTGTM AMLAVMGPNA RDLLGPLTDA DLSTEAFPFG TSRQIDLGLT HVRATRVTYV GELGWELLIP SESARHIWDT IMDAGEPHGL RNVGYHAMNS LRLEKAYRSW GHDISAGDNP IQAGLSFTVK WDKSSGFVGR EALEKVKSEG VARRLVQFVL EDPEPLLFHD EPIYRFGELV GRVASTQYGH TLGGAVALGW VEASEVVPRT WFESEPYEIE VGGRRVPARA SLSPMYDPKS ERPKQ
|
| |