Gene Noca_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0642 
Symbol 
ID4596059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp679574 
End bp682021 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content63% 
IMG OID639775241 
ProductFAD dependent oxidoreductase 
Protein accessionYP_921855 
Protein GI119714890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAGC AGCAACAGCC GGCGCGCGCG CAGGTCGTCA TCGTGGGTGG CGGCATCATT 
GGGACGAGCA CTGCGTATCA CCTGGCTTGC CGTGGTTGGA CGGACGTTGT ACTGCTTGAG
CGCAACACCC TGACTTCGGG CACGACTTGG CACGCGGCAG GGCTCGTGAC CCAGGCGCGA
GGGACATGGG GGACCCGCGA AGTCGTTCAG CGAAGTCTCG ACGTGTTCCG CAACCTCGAA
CACGACACCG GCTTCTCTAC CGGTTTCGTA AAGACCGGGA CGATGAACCT CGCCACGTCC
GCTGACCGGT TCGATGAGAT GCGCCAGCTT GCAAGCGTCG TCCGCGGGAA CGGTATCGAT
GCTGACCTTC TAGACGTCGA CCGCACGCTC GAACTCCACC CGCTCCTCAA CAGCGATGGT
CTCTACGGCA GCCTCTACTT CCCTGAGGAC GGTCGCGGTA GCGCCACCGA CACGACGATC
GCGCTGGCGC GCGGTGCGAC TAGTCGCGGC GTGCGAATCA TCGAGAACGT CGCTGTCGCC
GGCGTCATGA CAGCTGGCGA CCGTGTTCGC GGAGTGCGTA CGACAGCGGG GGACATCGAG
GCCGAGTACG TGGTGAACGC GACCGGCATG TGGGGCCGCG AGTTCGGGGA GATCGCAGGG
GTCGACGTCC CCCTCCAAGC ACTGGCCCAT TACTACGTTG TAACTGAGGC CATCAAGGAC
CTGCCACGGA ACCTCCCAAC CATCAAGAGC GGCGACGAGT ACTCGTACGT CAAGGACGAG
GCAGGCGCAC TCATGGTGGG CTTTTTTGAG CCTGGAAGCT ACGCATGGGC GTCGAGGGGC
ATCCCCGAGA GCGACGGCTA CATCCGACTT CCCGAGGACT GGGACCACCT CGGTGACTTC
TACGAAAGGA TGATGTATCG AGTCCCGGTC CTCGCCGATG CCGGCATACG CTTGCACTTC
TGCGGCCCCG AAAGCTTCAC CCCGGACGGC CAGTACCACC TGGGCGAGGC GCCTAACCTG
CGCAACTATT TCGTAGCTGC CGGCTTCAAT TCCGTCGGGT TCCTTTCCGG GCCTGGCGCC
GGATCTGTTC TCGCTGACTG GATCGTTGAC GGATACAGTC CCGTCGACCT CCCAGAGACC
GACCTCGGAC GGGTCCAAAC CCACGAGACC AACCGCAGAT TCCTCGAAGA GCGAGTCGTT
GAGTCACTTG ATATCTCTTA CGAGATCCAC TGGCCCTTCC AGCAGCGAGA ATCCGCCCGC
CAACTACGAG TGAGCCCGTT GTACGAACGA ACCGACGCGG CCGGCGCGGT ATTCGGAGAG
CTCGCCGGCT GGGAGCGCGC CAACTGGTAC GCCCCCGCAG GCGTCGTGCG CCGCTACGAG
TACTCCTTCG GACGCCCGAA CTGGTTCGAG CACTCGGCGG CCGAGCACAA CGCCATTCGC
GAAGCCGTCG GAATGATCGA CACCTCGTCC TTCGGCAAGC TCCTGGTTCA AGGACGCGAC
GCTGTGAGTG TGCTGAACCG ACTCTCGGTG AACCAGGTCG ACGTGCCGAT CGGACGCATC
GTCTACACCC AGTGGCTCAA CGACAACGCG GGCATCGAAG CCGACGTGAC CATCACCCGG
GTCGGCGAAA CTGAGTTTCT CGTCCTGTCC GGCCCAGCAA CCATCAACCG AGACCTCGCT
CATCTCCGAC GGCACATCGG TGACCAGTTC TGCACCGTCG CCGATGTCAC AGGGACCATG
GCCATGCTTG CCGTCATGGG CCCGAATGCC CGTGACCTCC TCGGCCCGCT CACCGATGCA
GACTTGTCGA CCGAGGCGTT CCCCTTTGGG ACGTCTCGGC AGATCGACCT CGGCTTGACC
CACGTCAGGG CTACTCGCGT GACTTACGTG GGCGAACTGG GATGGGAACT CCTGATCCCG
TCCGAGAGTG CAAGGCACAT CTGGGACACG ATCATGGACG CCGGCGAGCC GCACGGTCTC
CGCAACGTCG GTTATCACGC GATGAACTCG TTGCGGCTAG AGAAGGCCTA TCGAAGCTGG
GGGCATGACA TCTCCGCAGG CGACAACCCG ATCCAGGCGG GCCTCTCATT CACTGTCAAG
TGGGACAAGT CGTCGGGATT CGTCGGCCGC GAAGCGCTGG AGAAGGTGAA GAGTGAGGGC
GTCGCACGGC GTCTCGTGCA GTTCGTCCTG GAGGATCCGG AACCGCTCCT CTTCCACGAC
GAACCCATCT ATCGCTTCGG CGAGTTGGTC GGACGCGTCG CATCCACCCA GTACGGCCAC
ACCCTCGGCG GGGCTGTTGC GCTTGGCTGG GTCGAAGCGT CTGAGGTTGT ACCGCGCACC
TGGTTCGAGT CCGAGCCGTA CGAGATCGAG GTAGGCGGCC GGCGCGTCCC CGCTCGAGCT
TCCTTGAGTC CCATGTATGA CCCGAAGTCC GAAAGGCCCA AGCAGTGA
 
Protein sequence
MGEQQQPARA QVVIVGGGII GTSTAYHLAC RGWTDVVLLE RNTLTSGTTW HAAGLVTQAR 
GTWGTREVVQ RSLDVFRNLE HDTGFSTGFV KTGTMNLATS ADRFDEMRQL ASVVRGNGID
ADLLDVDRTL ELHPLLNSDG LYGSLYFPED GRGSATDTTI ALARGATSRG VRIIENVAVA
GVMTAGDRVR GVRTTAGDIE AEYVVNATGM WGREFGEIAG VDVPLQALAH YYVVTEAIKD
LPRNLPTIKS GDEYSYVKDE AGALMVGFFE PGSYAWASRG IPESDGYIRL PEDWDHLGDF
YERMMYRVPV LADAGIRLHF CGPESFTPDG QYHLGEAPNL RNYFVAAGFN SVGFLSGPGA
GSVLADWIVD GYSPVDLPET DLGRVQTHET NRRFLEERVV ESLDISYEIH WPFQQRESAR
QLRVSPLYER TDAAGAVFGE LAGWERANWY APAGVVRRYE YSFGRPNWFE HSAAEHNAIR
EAVGMIDTSS FGKLLVQGRD AVSVLNRLSV NQVDVPIGRI VYTQWLNDNA GIEADVTITR
VGETEFLVLS GPATINRDLA HLRRHIGDQF CTVADVTGTM AMLAVMGPNA RDLLGPLTDA
DLSTEAFPFG TSRQIDLGLT HVRATRVTYV GELGWELLIP SESARHIWDT IMDAGEPHGL
RNVGYHAMNS LRLEKAYRSW GHDISAGDNP IQAGLSFTVK WDKSSGFVGR EALEKVKSEG
VARRLVQFVL EDPEPLLFHD EPIYRFGELV GRVASTQYGH TLGGAVALGW VEASEVVPRT
WFESEPYEIE VGGRRVPARA SLSPMYDPKS ERPKQ