Gene Noca_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0622 
Symbol 
ID4596039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp660057 
End bp661448 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content66% 
IMG OID639775227 
ProductFAD dependent oxidoreductase 
Protein accessionYP_921841 
Protein GI119714876 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATC AGCAGGCCCA CGCGGCGGCC ACCCCCAGCT TCTGGCACGA GGATGCAGAC 
CTCGACTGGG CCCCGAAGGG ACCCCTCGAC GGTGACCTCG ATGTCGACGT GGCAATCGTG
GGCGGCGGGT ACACCGGCCT GTGGACCGCC TACTACCTGG CGAAGGCGGA TCCGAGTCTG
CGCATCGCCA TCCTCGAGAA GTACTTCGTG GGCTTTGGCG CCTCCGGGCG CAACGGCGGT
TGGTGCTCGG CAATCTTTCC GACGACCCTT CGGAAGGTGG CGGCCGACAG CTCGCGTTCG
GCGGCCGTAC GGATGCAGGA GGCGATGTTC GAGACCGTCA AGGAGGTCGG GGAGGTCGTT
GTAGCCGAGG GGATCGAATG TGACTTCCAG CCCGGCGGGT ACGTCTCGGT CGCCCGCAAC
GAGGCACAAT GGGTCAGAAG CCAACGAGAG GTCGATGGCT GGCGTGCCTG GGGATTCGGT
GAGGAACACT TCAGGATGCT CACCCCGGAT GAGGCCGCCG AGAGGGTCGC AACCTCACAC
ACTCTCGGCG GGACCTTCAC TCCCCACTGT GCTGTGGTTC AGCCGGCGAA GCTAGTGCGC
GGGCTCGGCG ACGTGGTTCG AGCCCTCGGA GTGAGGATCT TCGAGGCGAC GGAGGTTCGG
GAGATCCACA GTGGCGGCCT ATCGACCGCT CGCGGCACCG TGCGAGCCGA TGTCGTCGTC
CGCGCGACCG AGGGCTACAC GGCCCAGCTC AAGGGTGCAC GCCGCGAGGT CGTCCCGATG
TACTCCCTGA TGGTCGCGAC TGCCCCGTTG CCGGAGGAGA TCTGGCAGGA GATCGGGCTG
CGGGAGCGTG AGACATTCAG CGACAAACGT CACCTGCGGA TCTACGGTCA GCGCACTCGC
GATGGGCGAA TAGCTTTCGG CGGGCGCGGT GCGCCGTATC ACTTCGGCTC GCGGGTGAAG
CCCGAGTTCG ACGACGACAG GCGAGTTCAC GAAATGCTCC GCAACATCCT GGTTGACCTG
CTCCCGACCA TCAGGGGTGT GGAATTCACT CACGCTTGGG GTGGGAATCT AGGCATCCCG
CGAGACTGGT ACCCGTCGGT GGGTTACGAC CGTAGTTCCG GAATCGGGCA TGCGGGTGGC
TACGTCGGCG ACGGGGTCGC GACAGCGAAC CTTGCGGGCC GGACTCTCGC CGCCGAAATC
CTCGATCTGG AGAACGACGT GCGCTCGCTA CCTTGGGTCG GTCGAACCAC CCCCCGCTGG
GAACCCGAGC CACTACGTTG GATAGGCGTG AACGCCGGAA CCGCCGCCTT CAACATCGCC
GACCGCACGG AGGCGCGGTT CGGGAAGCCG TCACGATTGG CTTCCGGTCT CTGGAAAGTG
CTGGGTCACT GA
 
Protein sequence
MRDQQAHAAA TPSFWHEDAD LDWAPKGPLD GDLDVDVAIV GGGYTGLWTA YYLAKADPSL 
RIAILEKYFV GFGASGRNGG WCSAIFPTTL RKVAADSSRS AAVRMQEAMF ETVKEVGEVV
VAEGIECDFQ PGGYVSVARN EAQWVRSQRE VDGWRAWGFG EEHFRMLTPD EAAERVATSH
TLGGTFTPHC AVVQPAKLVR GLGDVVRALG VRIFEATEVR EIHSGGLSTA RGTVRADVVV
RATEGYTAQL KGARREVVPM YSLMVATAPL PEEIWQEIGL RERETFSDKR HLRIYGQRTR
DGRIAFGGRG APYHFGSRVK PEFDDDRRVH EMLRNILVDL LPTIRGVEFT HAWGGNLGIP
RDWYPSVGYD RSSGIGHAGG YVGDGVATAN LAGRTLAAEI LDLENDVRSL PWVGRTTPRW
EPEPLRWIGV NAGTAAFNIA DRTEARFGKP SRLASGLWKV LGH