Gene Noca_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0619 
Symbol 
ID4596036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp657099 
End bp658139 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID639775224 
Producthypothetical protein 
Protein accessionYP_921838 
Protein GI119714873 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGGG CCAAGACTCG CAGAGTGAGT GCAATTGCCG AAGACCCTGT CACCCCCGCG 
GGGGTGACGC GCGTCACCGT AGGGGACGCA CTACGTGTCA GCCACCAACT GGCGTTGACC
GCCGCCACAG CAATCGCGCC GATGGTCTGG GGGACGACAT ACTCCGTCAC AACCGAACTG
TTGCCTGCGA ACCGCCCACT GTTCGCAGCG CTGATGCGCT CCCTCCCGAT AGGGCTGCTG
GCGATACTCC TGACCCGAGT CCTGCCCAGG CGAGACTGGT GGTGGAAGGC AGCTGTACTC
GGCATGCTCA ACATCGGGTC CTTCTTTCCG TTGTTGTTCA TCGCAGCGGA ACGACTGCCG
GGCGGGGTCG CCGCGACCCT GGGAGCCGCT CAGCCTCTGT TCGTGACTGG GCTTGCGGTC
GTGATGCTCG GCGAGCGACT GTCACTCTTG CGGCTTGCCT GGGGTGTCGT CGGCCTGGTG
GGTGTGGGTC TCGTCGTCCT CGGGCCGGAT GTCGGGTTCG ACCCGTTCGG GATCCTCGCG
GGGCTAGTCG GCGCATGCGC CATGGGGGTC GGGATGACGC TCACGAAGCG ATGGGGACGG
CCGGCCGGGA TCAGTCCAAT CAGCTTCGCC GCATGGCAAC TGGCCGTAGG TGGGCTTGCC
CTGCTGCCCG CCACGCTTCT CGTCGAAGGT CTGCCCTCGC ATGTGGGCAT CTCAAGTGCA
GCGGGGTATT TGTGGCTCGG CGCGATCGGC GGCCTACTCG CCTACGCATT GTGGTTTAGA
GGTATCGGCC GCCTGCCGGT GACCTCTGCC GCCCTACTCG GCCTGGTGTC ACCGCTCGTG
GCAGCGCTCA TGGGGATGCT TCTGGGAGAG CGCCTCAACT CGATTCAGGT CTTCGGGTTC
GTGCTCGCTC TCATCGCTGT CGTCGGCGGT TCAGCTCGAG TCAGGCCGAT TCAGACCGAC
CGTATCCAGC AGAAGGCGAC ACTGAACTTG GTCCAACCTG ACAAAGTGCC CGCAGAGAAT
CCGGCTAGGT TCCGACCATG A
 
Protein sequence
MTRAKTRRVS AIAEDPVTPA GVTRVTVGDA LRVSHQLALT AATAIAPMVW GTTYSVTTEL 
LPANRPLFAA LMRSLPIGLL AILLTRVLPR RDWWWKAAVL GMLNIGSFFP LLFIAAERLP
GGVAATLGAA QPLFVTGLAV VMLGERLSLL RLAWGVVGLV GVGLVVLGPD VGFDPFGILA
GLVGACAMGV GMTLTKRWGR PAGISPISFA AWQLAVGGLA LLPATLLVEG LPSHVGISSA
AGYLWLGAIG GLLAYALWFR GIGRLPVTSA ALLGLVSPLV AALMGMLLGE RLNSIQVFGF
VLALIAVVGG SARVRPIQTD RIQQKATLNL VQPDKVPAEN PARFRP