| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0608 |
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| Symbol | |
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| ID | 4596025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 642623 |
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| End bp | 643873 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639775215 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_921829 |
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| Protein GI | 119714864 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCG AGTCCGACCT GCAGGTCGTG GCGAACGCGG TCCGGGCGCG GATCCCTGAA
CTCGTCTCGG CGATCGAACG GACTTCCGCA CAAGAGGTTC CTGAGATCTA CGAGAAGGAC
GACCCGGTAT ACAAGGAAGC CGAACGCTCC AGTGTCCTGT CTGCACTCAC GAGCATCGTC
GAGGGCTTGG CCGGTGGACG CCGGCCACCC GACCGTCCTT CCGATGCTGC ACTCCAGGAA
GCTCGGATTG CGGCCCAGGC TGGCATCGAT CTGCACTCTT TGTTGCGCAC GTATCGGGTG
GGTCAGTCGA TCTTGTGGGA CGCGATCCTG GAGGAGACCT TGCATGTGGT CGACTCGGAC
GAGCGGCGCA TGGCCGTCCT AAAGCAGGCC TCGGACTACC AGTACGGGTG GAACAACAAG
GTGATGGAGT CCGTCATCGC CGCCTATCAA GCCGAACACA ATGCCTACTT CTTCAGGAGT
CAGGACCGGA AGCGACGTGC GGTCGTCAGT GACATCCTGC GAGGGATACC GGCCGACGTT
CAGCAACTCG GTTACAGCCT GCGTGCGGAG CACCTGGCTG TCGTCGCATG GGGACGCTCG
CCTGAGGCCA ACATTCGGGC GCTAGCCGTC AGTTTGGACG CGAGGCACCT GACCGTGAGC
GGCACCTCTG GGACGTACCT GGGCTGGTTA GGCTCGTCAT CGTTGAAGCG AGTACTAGTC
GAGCGGCCGG AGGCTGCCCG GGCGATGCGC GAGACCCATC TTGCTCTGGG CGAGGTGGCG
CACGGGATCG ATGGCTTCCG GTTGAGTCAC CGTCAGGCGT GGCAGGCATA CCGAGTAGGC
AAGCTACGAG CCGCGGGCCT CGTTAACTAC GCCGATGTCG CACTAGAGGC ACTGATGCTC
AAGGACCGTC AAGCCGTCCA AGACTTTGTG TCGCGTGAGC TAGGTCCCCT GCATGACGAG
GAAGATCCGC GTGGTGAGTT GTTGAAGTCC ACCTTGCGGG CCTATTTCAG GTCCGGACAG
AATGCGGCCT CTACGGCACA GGCCATTCAC GTCCACGAGC GTACGGTGGC TTACCGCCTG
CGCTCGATCG AGTCCCGACT CGGGGTGACC ATCGGCGCTC GTCGGGACGA GCTGGCCGCG
GCACTTCGCC TCGCTGACCT CCTAGGCCAG GTCTCAAGTG CGGACCTCCG CGATCTTGAT
GCGCAGGCGG ACGCCGGCTT GGGCCCCGAC CCCGAGGCTG CCGCTCAGTA A
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| Protein sequence | MTIESDLQVV ANAVRARIPE LVSAIERTSA QEVPEIYEKD DPVYKEAERS SVLSALTSIV
EGLAGGRRPP DRPSDAALQE ARIAAQAGID LHSLLRTYRV GQSILWDAIL EETLHVVDSD
ERRMAVLKQA SDYQYGWNNK VMESVIAAYQ AEHNAYFFRS QDRKRRAVVS DILRGIPADV
QQLGYSLRAE HLAVVAWGRS PEANIRALAV SLDARHLTVS GTSGTYLGWL GSSSLKRVLV
ERPEAARAMR ETHLALGEVA HGIDGFRLSH RQAWQAYRVG KLRAAGLVNY ADVALEALML
KDRQAVQDFV SRELGPLHDE EDPRGELLKS TLRAYFRSGQ NAASTAQAIH VHERTVAYRL
RSIESRLGVT IGARRDELAA ALRLADLLGQ VSSADLRDLD AQADAGLGPD PEAAAQ
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