Gene Noca_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0553 
Symbol 
ID4596220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp586031 
End bp586432 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content71% 
IMG OID639775167 
ProductDNA binding domain-containing protein 
Protein accessionYP_921782 
Protein GI119714817 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTGG TCCTCGATGA TGACCCGACG ACCGTCGCGC AACTGACCGC CGCGCTGACC 
GGCTACGTGC GCCAGCTGCG GCGCAACGGC GGCTATCCGG CGCCCGACCT GCTCCTGTTG
ATGCGGTCAG TTCAGGCCAG GAGCGGCCAG GAGCGGCCAA AGCTCGCGCC GGGTGCTCGG
CCGTCGCACA GTGATTCCGA ACCGGCCGAC GGGGCCGGCG CGGGACCGGA GGTGATCGGG
TTGACGTACG GACAGACCGC CCAGCGGCTC GGCATCAGCG AGCGCACGGT CCGACGCCGC
GTGACCTCGG GCGAGCTGCC GGTGATCCGG TTGGGTGCCC GTGTGGCCCG GATCCCGGCA
TCCGCTGTGG ACGCACTCGC CGAGCAGGGG AAGGTGTCAT GA
 
Protein sequence
MIVVLDDDPT TVAQLTAALT GYVRQLRRNG GYPAPDLLLL MRSVQARSGQ ERPKLAPGAR 
PSHSDSEPAD GAGAGPEVIG LTYGQTAQRL GISERTVRRR VTSGELPVIR LGARVARIPA
SAVDALAEQG KVS