Gene Noca_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0540 
Symbol 
ID4596207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp574832 
End bp575653 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID639775154 
Productsulfate ABC transporter, inner membrane subunit 
Protein accessionYP_921769 
Protein GI119714804 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGAGG TCTCCACGCC CACCCGTTGG CTGCTGCGGG CGCTCGCCAC CGGCTACGTG 
TTCTTCCTCG TGGCCTGGCC GGTCGGCCTG CTGGGACGCC GTACGTTCGA CGGCGGCCCG
GGGAACCTGA CCGACATGCT CGCCGACGAC CGTGCGGTCG CCGCGCTCCA GCTGACCGCC
GTGGTCGCGT TCTGGGCGGT GGTCATCAAC CTGGTCTTCG GGGTGACCGT CTCGATCCTC
CTGGTGCGCT ACGAGTTCCC GGGCAAGCGG GTGCTCTCGG CGCTGATCGA CCTGCCGCTC
TCGGTGTCTC CCGTCGTCGT CGGGCTCGCC CTGGTGCTGG TCTACAACGG CCGCGACGGC
TGGTTCGGCA CGACCCTGGA GGACAACGGC CTGCAGGTGA TCTTCAACAG CCCGGGCATG
ATCATGGCGA CCTGCTTCGT CGCGCTGCCG CTGGTCATCC GCGAGGTGGT CCCCGTGCTC
ACCGAGATCG GCGACGATCA GGAGCAGGCG GCCCGCAGCC TCGGTGCCGG CGCCCGGCAG
ACCTTCCTGC GGATCACCCT GCCGAGCATC AGGTGGGCCC TCGTGTACGG CGTGGTCCTC
GCGCTGGCCC GGTCGATCGG CGAGTTCGGC GCCGTGAAGA TCGTCTCCGG CAACATCACC
GGCCGCACCC AGACCGCGAC CCTCGCGGTC GAGGCGAAGT ACCAGAACTT CCAGCAGCCC
GAGGCGTACG CGATCGCGTT CCTGCTCGCC CTGGTGTGCA TCGCCTGCCT GGTCGTCGTC
GCCGTCCTGC GCCCCCGGCG CGCCCACCGA CCCCGCCCCT GA
 
Protein sequence
MVEVSTPTRW LLRALATGYV FFLVAWPVGL LGRRTFDGGP GNLTDMLADD RAVAALQLTA 
VVAFWAVVIN LVFGVTVSIL LVRYEFPGKR VLSALIDLPL SVSPVVVGLA LVLVYNGRDG
WFGTTLEDNG LQVIFNSPGM IMATCFVALP LVIREVVPVL TEIGDDQEQA ARSLGAGARQ
TFLRITLPSI RWALVYGVVL ALARSIGEFG AVKIVSGNIT GRTQTATLAV EAKYQNFQQP
EAYAIAFLLA LVCIACLVVV AVLRPRRAHR PRP