| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0535 |
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| Symbol | |
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| ID | 4596202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 567946 |
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| End bp | 569427 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639775149 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_921764 |
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| Protein GI | 119714799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.595832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAGG TCTCAGGAGC GCGTCGTGTA GGTCTTGTAG ACGTGCGTCC AGGACTGGGC
GTACCCGCCG TAGGCCCTGA CGTAACCCCG CCAGTACCAG TTGCCGTGCT CGGGCGCGAG
CACGCGGACC TGCCAGCGCT CCTTCGGCCC GTGCGTGGAC ACCCGCTTGA ACACCTTCCA
CTTGCACGTG GCCGACGAGC ACTGCTTCTT CTGCACGACG ACCGGGCCGT GCCCGGGATC
GACCCGGCCC TTGAAGTAGA GCTTGCCGTT CCGCTTCACG ATCGAGTCGT GCAGGTCGCG
GGTCGGCTGC TCGGTCCCCC GACCGACCGG CGCACTCGCA ATCGTCCGGG CGGCGGCGTC
GGCCGCAGCG CTCGCCGCCT GGGCGGGTCC CGCGGCCGCG GTCAGGCCGC CCACGCCCAG
GGCGAGCGCG GCGGTCAGGG TCGTCAGGGT CTGACGCATC CGTGGGGTCT CCCTCCGAGA
GTCGCGGGCG CTCCTGATCG GCCCCGTGCC CGAAACCTGC CCCTGGGCCC TCAGGGCCAA
ACGCCTGCGA CGCCCTCTTA TGCTGTGCGG GTGCCGGAAC CGCGTCGTGG GCTTGCGTTC
GGGTTCGCGG CGTACGCCAT GTGGGGAGCC TTCCCGCTCT ACTGGCCGTT GCTGGAGCCC
GCCGGGGCGA CCGAGATCCT CGCACACCGC GTGCTCTGGT CCGCCCTCAC GATGGGCCTC
CTCCTGCTGG TGCTGGCCCG GACGCCGCAG CTGCGCGCGG TGCTGCGCGA CCGGCGCGTC
CGGCTCCTGC TGACCATCGC CGCCGCGGTG ATCAGTGTGA ACTGGGTGAC CTACATCTGG
GGCGTCAACA ACGACCGGGT CGTCGAGACC TCCCTGGGAT ACTTCATCAA CCCGCTCGTG
ACCGTGCTGA TGGGTGTCGT GGTCCTCCAC GAGCGGCTGC GCCCGCTGCA ATGGATGGCG
ATGGGGCTCG CGTCCGGAGC GGTCGTCGTC CTCGCTGTCG ACTACGGGCG ACTGCCATGG
GTGGCCCTGA TCCTGGCGTT CTCGTTCGGC AGCTACGGCC TGTGCAAGAA GACCGCGAAC
GTCGGGGCGA CCGAGAGCCT CGCGTTCGAG ACCGCCGTGA TCGCTCCGTT CGCCGCCGGC
TACCTGGCCT GGCTGGGTTG GACCGGCGGG TCGAACTTCG CCAGCCACGG CGCGGGTCAC
GCGCTGCTGT TCGCCACGAC CGGCGTCGTC ACCGCCGTAC CGCTGATCTG CTTCGGCGCG
GCCGCGACCC GGGTGTCCAT GGTGACCCTG GGCCTGCTGC AGTACCTCGC GCCGATCATC
CAGTTCGCCC TCGGAGTGCT GTGGTTCCAC GAGGACATGC CTGCCGGCCG CTGGGTCGGG
TTCGTCCTGG TCTGGATCGC CCTGGTGGTG TTCACCGTCG AGGCGGTCAA CCACCGCCGC
CGCCAGCTGC GCCTCACCGT CGAGGCCACC ACCGCGAGCT AG
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| Protein sequence | MPEVSGARRV GLVDVRPGLG VPAVGPDVTP PVPVAVLGRE HADLPALLRP VRGHPLEHLP
LARGRRALLL LHDDRAVPGI DPALEVELAV PLHDRVVQVA GRLLGPPTDR RTRNRPGGGV
GRSARRLGGS RGRGQAAHAQ GERGGQGRQG LTHPWGLPPR VAGAPDRPRA RNLPLGPQGQ
TPATPSYAVR VPEPRRGLAF GFAAYAMWGA FPLYWPLLEP AGATEILAHR VLWSALTMGL
LLLVLARTPQ LRAVLRDRRV RLLLTIAAAV ISVNWVTYIW GVNNDRVVET SLGYFINPLV
TVLMGVVVLH ERLRPLQWMA MGLASGAVVV LAVDYGRLPW VALILAFSFG SYGLCKKTAN
VGATESLAFE TAVIAPFAAG YLAWLGWTGG SNFASHGAGH ALLFATTGVV TAVPLICFGA
AATRVSMVTL GLLQYLAPII QFALGVLWFH EDMPAGRWVG FVLVWIALVV FTVEAVNHRR
RQLRLTVEAT TAS
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