| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0527 |
|---|
| Symbol | |
|---|
| ID | 4596447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 558711 |
|---|
| End bp | 560060 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639775141 |
|---|
| Product | NADH dehydrogenase subunit H |
|---|
| Protein accession | YP_921756 |
|---|
| Protein GI | 119714791 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC TGACCGCACC GCTCCCGATG GCGACCGACG CCCTCTCGCA GTTCGGGCAC
GACGCGTGGT GGGTGATCGG GCTCAAGGCC GTGCTGATCC TGGTCGTGCT CCTGCTGCTG
ACGCTGTTCA ACATCTGGTT CGAGCGGCGC GTGGTCGGCC GGATGCAGCA CCGGCCCGGG
CCCAACGTCA ACGGACCCTT CGGGCTCCTG CAGTCGCTGG CCGACGCCCT CAAGCTGATC
TTCAAGGAGG GCATCATCCC GAAGGCGGCC GACAAGGCCG TCTACCTGAT CGCCCCGGTG
ATCGCCGTGA TCCCGTCCTT CATCACGTTC TCGGTGATCC CGTTCGGGCC CGAGGTGACG
ATCCCGTTCA CCGACACCCG CACGCCGCTC CAGCTCACCG ACATGCCGGT CGCCGTGCTG
TTCGTCATGG CGATCGCCTC GATCGGCATC TACGGCATCG TGCTCGGGGG ATGGTCGAGC
GGTTCGACGT ACTCCCTGCT CGGCGGCCTG CGCTCGAGCG CCCAGATGAT CTCCTACGAG
GTCGCGATGG GCCTCGCGCT GGTCGCGGTG TTCCTGTACG CCGGCTCGAT GTCGACCTCG
GAGATCGTCG CGGCCCAGGA CAACCTCTGG TACGGGCTGA TCCTGGTGCC CTCGTTCGTG
ATCTACCTGA TCGCGATGGT CGGCGAGACC AACCGCGCGC CGTTCGACCT CCCCGAGGCC
GAGGGTGAGC TGGTGGGCGG GTTCCACACC GAGTACTCCT CGATGACCTT CGCCCTGTTC
TTCCTGGCCG AGTACATCAA CATGGCGACC GTGTCCGCCG TCGCGACCAC CCTGTTCCTC
GGCGGCTGGC ACGCGCCGTT CTGGCTCGAC CACGCCTGGG CGGGCGCGAA CGAGGGCTAC
TGGCCACTGC TGTGGTTCCT CGGCAAGGTC TTGTTCTTCG TCTTCATCTT CATCTGGCTC
CGCGGCACCC TGCCCCGCCT GCGCTACGAC CAGTTCATGG CGTTCGGGTG GAAGCGGCTG
ATCCCGGTCG CGCTGGTCTG GATCGTCGCG GTCGCGACGA TCCGGTCGAT CTCGCTCGAC
GGCGGCGTCG ACCGGCGCTA CCTGCTGATC GGCATCGGCG CCCTCGCCGT GGTCTTCCTG
GTCCTGTTCT TCATCGGCGG GGCCGCCGAG GAGCAGCCGA CCACGGTGCC GGAGGCCGCG
CCTGCCGGCG GGTACCCCGT ACCCCCGATG CCGGCCGGCG GTCCGGTCCG CGGGGCCGCG
GTCCCGCTCA CGTTCGACCG CAGTTCACCC ATCGCCTCGT CGATGCCACA GCCCAGCGCT
GCCACCCGCA GCGCGGGGGA GGAGATCTGA
|
|---|
| Protein sequence | MNTLTAPLPM ATDALSQFGH DAWWVIGLKA VLILVVLLLL TLFNIWFERR VVGRMQHRPG
PNVNGPFGLL QSLADALKLI FKEGIIPKAA DKAVYLIAPV IAVIPSFITF SVIPFGPEVT
IPFTDTRTPL QLTDMPVAVL FVMAIASIGI YGIVLGGWSS GSTYSLLGGL RSSAQMISYE
VAMGLALVAV FLYAGSMSTS EIVAAQDNLW YGLILVPSFV IYLIAMVGET NRAPFDLPEA
EGELVGGFHT EYSSMTFALF FLAEYINMAT VSAVATTLFL GGWHAPFWLD HAWAGANEGY
WPLLWFLGKV LFFVFIFIWL RGTLPRLRYD QFMAFGWKRL IPVALVWIVA VATIRSISLD
GGVDRRYLLI GIGALAVVFL VLFFIGGAAE EQPTTVPEAA PAGGYPVPPM PAGGPVRGAA
VPLTFDRSSP IASSMPQPSA ATRSAGEEI
|
|---|
| |