Gene Noca_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0516 
Symbol 
ID4596436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp547044 
End bp548330 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content74% 
IMG OID639775130 
Productisochorismate synthases 
Protein accessionYP_921745 
Protein GI119714780 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.868248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACCC TCGGCAGGGT GACGAGCAGC CCCACACCCG GCGATCCGCC GCCGGCCCCG 
GCGGACGCGC TCGTCGTCCG CACGGTCCGC CTCGATCTCG ACCAGGCGGC GAGCCTGCTG
GACCTGGTCC CGGCCGACCG GCCGGTCACC TGGTTGCGGC GGGGCGACGG CCTGGTCGGT
TGGGGCGTCG CCGCCCAGGT GCGCACCAGC GGGGCCACCC GGTTCGCCGA CGCCGTGAAG
TGGTGGAGCG AGACCATCGC TCGGGCGGAC GTGCACGACG ACGTCAACGA GCCTGGCACC
GGCCTCGTGT CGTTCGGGTC GTTCGCGTTC GCCGACGACC CGGGCGACTC GATCCTGGTC
CTCCCCCGCG TGGTCGTCGG ACGCCGCGGC GACGTCACGT GGCTCACCAC GGTCGGCGAG
GTCGGACCCC CGCTCGGGCC GGTGGAGCGT CCAGCGGCCC CGGCCGCGGT CAGCTTCGCC
GACGGCGCGC TGAACGGCGA GCAGTGGATG TCCGTGGTCG CCGACGCCGT GGCACGGATC
AACGCCGGCG ACCTGGAGAA GGTCGTGCTC GCTCGGGACC TGGTCGCCAC GGCGAGCGAC
CCGGTCGACG TACGCTGGCC GTTGGGCCGG CTCGGCGAGA CCTATCCGAT GTGCTGGACG
TTCCACGTCG ACGGCATGTT CGGGGCGACC CCGGAGATGC TGGTGCGCCG CGAGCGCGGC
CTGGTGACCT CGCGGGTGCT GGCCGGCACC ATCCGCCGCA CCGGCGACCA CGAGCGCGAC
CTGGCCCTGG CCGCGACCCT GGCCCATTCC TCCAAGGACC TCGAGGAGCA CGAGTACGCC
GTCCGCTCGG TCGCCGACGC GCTCGAGCCG CACTGCTCGT CGATGAACGT GCCCGAGGCT
CCGTTCGTGC TGCACCTGCC GAACGTCATG CACCTGGCGA CCGACGTGGC CGGCGTGGTC
CATGACGCGG CCACCGTGTC CTCGCTCCAG CTCGCCGAGG CGCTGCACCC GTCGGCCGCC
GTCGGCGGCA CGCCGACCCC GGTCGCGACC GCGTTGATCG CGGACATCGA GGGCATGGAC
CGCGACCGCT ACGCCGGGCC GGTCGGGTGG ATGGACGCCT CCGGCGACGG CGAGTGGGGC
ATCGCCCTGC GCTCCGCCCG TCTCGAGGGC CGCACCGTCC GGCTGTTCGC CGGCTGCGGC
ATCGTCGCCG ACTCCGACCC AGCCGCGGAG CTCGCCGAGG CCCAGGCCAA GTTCGTCCCG
GTCCGCGACG CGCTCACCGC GTCCTGA
 
Protein sequence
MSTLGRVTSS PTPGDPPPAP ADALVVRTVR LDLDQAASLL DLVPADRPVT WLRRGDGLVG 
WGVAAQVRTS GATRFADAVK WWSETIARAD VHDDVNEPGT GLVSFGSFAF ADDPGDSILV
LPRVVVGRRG DVTWLTTVGE VGPPLGPVER PAAPAAVSFA DGALNGEQWM SVVADAVARI
NAGDLEKVVL ARDLVATASD PVDVRWPLGR LGETYPMCWT FHVDGMFGAT PEMLVRRERG
LVTSRVLAGT IRRTGDHERD LALAATLAHS SKDLEEHEYA VRSVADALEP HCSSMNVPEA
PFVLHLPNVM HLATDVAGVV HDAATVSSLQ LAEALHPSAA VGGTPTPVAT ALIADIEGMD
RDRYAGPVGW MDASGDGEWG IALRSARLEG RTVRLFAGCG IVADSDPAAE LAEAQAKFVP
VRDALTAS