Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0516 |
Symbol | |
ID | 4596436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 547044 |
End bp | 548330 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639775130 |
Product | isochorismate synthases |
Protein accession | YP_921745 |
Protein GI | 119714780 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.868248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTACCC TCGGCAGGGT GACGAGCAGC CCCACACCCG GCGATCCGCC GCCGGCCCCG GCGGACGCGC TCGTCGTCCG CACGGTCCGC CTCGATCTCG ACCAGGCGGC GAGCCTGCTG GACCTGGTCC CGGCCGACCG GCCGGTCACC TGGTTGCGGC GGGGCGACGG CCTGGTCGGT TGGGGCGTCG CCGCCCAGGT GCGCACCAGC GGGGCCACCC GGTTCGCCGA CGCCGTGAAG TGGTGGAGCG AGACCATCGC TCGGGCGGAC GTGCACGACG ACGTCAACGA GCCTGGCACC GGCCTCGTGT CGTTCGGGTC GTTCGCGTTC GCCGACGACC CGGGCGACTC GATCCTGGTC CTCCCCCGCG TGGTCGTCGG ACGCCGCGGC GACGTCACGT GGCTCACCAC GGTCGGCGAG GTCGGACCCC CGCTCGGGCC GGTGGAGCGT CCAGCGGCCC CGGCCGCGGT CAGCTTCGCC GACGGCGCGC TGAACGGCGA GCAGTGGATG TCCGTGGTCG CCGACGCCGT GGCACGGATC AACGCCGGCG ACCTGGAGAA GGTCGTGCTC GCTCGGGACC TGGTCGCCAC GGCGAGCGAC CCGGTCGACG TACGCTGGCC GTTGGGCCGG CTCGGCGAGA CCTATCCGAT GTGCTGGACG TTCCACGTCG ACGGCATGTT CGGGGCGACC CCGGAGATGC TGGTGCGCCG CGAGCGCGGC CTGGTGACCT CGCGGGTGCT GGCCGGCACC ATCCGCCGCA CCGGCGACCA CGAGCGCGAC CTGGCCCTGG CCGCGACCCT GGCCCATTCC TCCAAGGACC TCGAGGAGCA CGAGTACGCC GTCCGCTCGG TCGCCGACGC GCTCGAGCCG CACTGCTCGT CGATGAACGT GCCCGAGGCT CCGTTCGTGC TGCACCTGCC GAACGTCATG CACCTGGCGA CCGACGTGGC CGGCGTGGTC CATGACGCGG CCACCGTGTC CTCGCTCCAG CTCGCCGAGG CGCTGCACCC GTCGGCCGCC GTCGGCGGCA CGCCGACCCC GGTCGCGACC GCGTTGATCG CGGACATCGA GGGCATGGAC CGCGACCGCT ACGCCGGGCC GGTCGGGTGG ATGGACGCCT CCGGCGACGG CGAGTGGGGC ATCGCCCTGC GCTCCGCCCG TCTCGAGGGC CGCACCGTCC GGCTGTTCGC CGGCTGCGGC ATCGTCGCCG ACTCCGACCC AGCCGCGGAG CTCGCCGAGG CCCAGGCCAA GTTCGTCCCG GTCCGCGACG CGCTCACCGC GTCCTGA
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Protein sequence | MSTLGRVTSS PTPGDPPPAP ADALVVRTVR LDLDQAASLL DLVPADRPVT WLRRGDGLVG WGVAAQVRTS GATRFADAVK WWSETIARAD VHDDVNEPGT GLVSFGSFAF ADDPGDSILV LPRVVVGRRG DVTWLTTVGE VGPPLGPVER PAAPAAVSFA DGALNGEQWM SVVADAVARI NAGDLEKVVL ARDLVATASD PVDVRWPLGR LGETYPMCWT FHVDGMFGAT PEMLVRRERG LVTSRVLAGT IRRTGDHERD LALAATLAHS SKDLEEHEYA VRSVADALEP HCSSMNVPEA PFVLHLPNVM HLATDVAGVV HDAATVSSLQ LAEALHPSAA VGGTPTPVAT ALIADIEGMD RDRYAGPVGW MDASGDGEWG IALRSARLEG RTVRLFAGCG IVADSDPAAE LAEAQAKFVP VRDALTAS
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