| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0489 |
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| Symbol | |
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| ID | 4597388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 519078 |
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| End bp | 519878 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639775103 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_921718 |
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| Protein GI | 119714753 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTGGG AGGACACCGA CGTCGCGCGC GGTCTCGACG CGCTGCGACG CCTCGTGGCC
CACGTGCTTG TCCTGGAGCA GCCCCAGCTC GCCGGGACAC CCGGGATGCT CGCCACCGAG
GCGGTCGCCA GCGGGCGCGC GGAGATGCGC GCGAAGACCC GCCCCAAGAG CGGCCCCGGG
ACCGGCGACG GCGGTCCCGA CGGGTACGGC GACGCGGAGC TCGCCACCTC CTCGGAGGAG
GACGAGGCCG AGCGGAGCCG GCTGATCGCG CTGGTGGAGC TGGCCCGCAA GGGCGACGCC
GACGCCTTCG GCCTCCTCTA CGACCACTAC CAGCCCTCGG TCTACCGCTT CCTCTTCTAC
CGGACCCGGT CCGGCACCCT CGCCGAGGAC CTGACCTCCG AGACCTTCTT CCGCGCGTTG
CGGAGCATGA ACAACTTCCG CTGGCAGGGC AAGGACTTCG GCGCCTGGCT GATGACGATC
GCCCGCAACC TCGCGACCGA CCACTTCAAG GCCGGCCGGA CCCGCCTCGA GCTCACCACC
GAGGACATGG GCCTGCACGA CGACGCGACC GAGGGCCCGG AGTCGATGGT GCTCGCCGGG
CTCACCAACG AGCTGCTGCT GCACGCCCTG ACCGAGCTGC CGCCCGAGCA GCGCGACTGC
CTGGTGATGC GGTTCCTCCA GGGGATGAGC ATCGCCGAGA CGGCGGCCGT CCTGGGCCGC
AGCGACGGGG CCGTCAAGCA GCTCCAGCTG CGTGGGGTGC GCAACCTCGC GAAGCTGATG
CCCGAGGGGA TCCGGGACTG A
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| Protein sequence | MSWEDTDVAR GLDALRRLVA HVLVLEQPQL AGTPGMLATE AVASGRAEMR AKTRPKSGPG
TGDGGPDGYG DAELATSSEE DEAERSRLIA LVELARKGDA DAFGLLYDHY QPSVYRFLFY
RTRSGTLAED LTSETFFRAL RSMNNFRWQG KDFGAWLMTI ARNLATDHFK AGRTRLELTT
EDMGLHDDAT EGPESMVLAG LTNELLLHAL TELPPEQRDC LVMRFLQGMS IAETAAVLGR
SDGAVKQLQL RGVRNLAKLM PEGIRD
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