| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0483 |
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| Symbol | |
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| ID | 4597382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 513595 |
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| End bp | 514779 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639775097 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_921712 |
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| Protein GI | 119714747 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.275495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCT GCCAGGGACC GGCGACCGTC GTGTTCGACC CCAGCCTGAC CGCGTACGAC
TTCGGCCCGA CCCATCCGAT GTCCCCGCTG CGGGTCGACC TGACCATCCG GCTGGCCGAG
GAGCTCGGCG TCCTGGCCGG GCTGCGGCGG GTCGACGCCC CCGTGGCCAC CGACGAGGTG
ATCGCGACGG TGCACCGGCC CGCGCTCATC GAGGCGGTAC GCCGTGCCGG CACCATGCCC
GGCATCCTCG ACGAGGCCCA CGGGCTGGGC ACCGACGACA ACCCGACCTT CCCGGACATG
CACCACGCGG CCGCGCACAT CGTCGGTGCG ACCGTCGAGG CCGCCCGTCA GGTGTGGTCG
GGGGAGTCCC TCCACGCCGT GAACATCAGC GGCGGCCTCC ACCACGCGAT GCCGGAGCGG
GCCAGCGGCT TCTGCATCTA CAACGACGTC GCGGTCGGCA TCCAGCACCT CCTCGACAGC
GGGGCGAAGC GGGTGGCCTA CGTGGACGTC GACGTCCATC ACGGCGACGG GGTGGAGAAG
GTGTTCTGGG ACGACCCGCG GGTGCTGACG ATCTCGCTGC ACGAGACGGG CCAGATGCTG
TTCCCCGGCA CGGGGTTCCC GACCGACGCC GGCGGCCCGG CGGCGCGGGG TACGGCCGTC
AACGTGGCGC TGCCCCCCGG CACCGGCGAC GGCGGCTGGC TGCGCGCCTA CCACGCCGTG
GTGCCCCCGC TGGTGCGCGA GTTCGCGCCC GACGTCCTGG TCACCCAGCA CGGCTGCGAC
TCCCACATCG AGGACCCGCT GGCGCACCTG ATGCTCTCCG TGGATGGACA GCGGGCGGCC
TACCTGGCCC TCCACGAGCT GGCCCACGAG GTCTGTGGTG GGCGGTGGGT CGCCACCGGC
GGCGGCGGAT ACGCCCTGGT CGAGGTGGTC CCGCGGGCCT GGACCCACCT GCTGGCGATC
GTGGCCGGCC GGCCGCTCGA CCCGGCCACC GAGACCCCGG AGGGGTGGCG CAGGCACGTG
CAGACCACGT TGGACCAGGT CGCACCCCAC CGGATGACCG ACGGCCGGAC CCCGGCGTAC
CGGGACTGGA TCGACGGCTA CGACCCCGAG ATCTGGCTGG ACCGGGCGAT CCACAGCACC
CGGATGGAGG TCTTCCCGCT GCACGGGCTC GACCCGTTTC CCTGA
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| Protein sequence | MPACQGPATV VFDPSLTAYD FGPTHPMSPL RVDLTIRLAE ELGVLAGLRR VDAPVATDEV
IATVHRPALI EAVRRAGTMP GILDEAHGLG TDDNPTFPDM HHAAAHIVGA TVEAARQVWS
GESLHAVNIS GGLHHAMPER ASGFCIYNDV AVGIQHLLDS GAKRVAYVDV DVHHGDGVEK
VFWDDPRVLT ISLHETGQML FPGTGFPTDA GGPAARGTAV NVALPPGTGD GGWLRAYHAV
VPPLVREFAP DVLVTQHGCD SHIEDPLAHL MLSVDGQRAA YLALHELAHE VCGGRWVATG
GGGYALVEVV PRAWTHLLAI VAGRPLDPAT ETPEGWRRHV QTTLDQVAPH RMTDGRTPAY
RDWIDGYDPE IWLDRAIHST RMEVFPLHGL DPFP
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