Gene Noca_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0478 
Symbol 
ID4597377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp508897 
End bp509646 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID639775092 
ProductABC transporter related 
Protein accessionYP_921707 
Protein GI119714742 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGGTG GGGCCTCCGT ACGCATAATT CAACGCATGG TGAAAAACGC GGTGGAGATC 
CGCGACCTCC ACGTCGTCCG GGGTCCGCAC ACCGTCCTCG AGCACCTCGA CCTGACGATC
GGGGGCGGGG TCACCGGGCT GCTCGGCCCG TCCGGGTGCG GCAAGTCGAC GCTGATGCGC
TGCCTGGTCG GCGTACAACG GATCCGCGGC GGGACCGTCG AGGTCTTCGG CCTGCCGGCG
GGCAGCCGCC CGCTCCGGGA CCGGGTCGGC TACGTCACCC AGGCGGTCAG CGTCTACCAC
GACCTGACCG TCGCCGAGAA CCTGCACTTC TTCGCGCGGG TGCTGGGCGC GGGCCGCGCC
GAGGTCGACC GGGCGATCAC CGCCGTGGAC CTGGCCGACC ACCGCGACGA CGTCGTCGGA
CGGCTCAGCG GTGGGCAGCA GTCGCGCGCG AGCCTGGCGG TCGCGCTGCT GGACGAGCCG
GACCTGCTGG TGCTCGACGA GCCGACGGTG GGACTCGACC CGGTGCTCCG CGAGGACCTG
TGGAACCTCT TCCACCGCCT GGCCGACGCC GGTGTCGCCG TCTTCGTCTC CAGCCACGTC
ATGGACGAGG CCGAGCGCTG CGACCGGCTG CTGCTGATGC GGCAGGGCCG GATCCTCGCC
GACGGGACGC CCGCCGAGAT CAAGGCCGCG GCCGGCGTCG ACGACGTCGA GGCCGCGTTC
CTCGCGCTGG TCAGGAGGGA CGCGGCATGA
 
Protein sequence
MPGGASVRII QRMVKNAVEI RDLHVVRGPH TVLEHLDLTI GGGVTGLLGP SGCGKSTLMR 
CLVGVQRIRG GTVEVFGLPA GSRPLRDRVG YVTQAVSVYH DLTVAENLHF FARVLGAGRA
EVDRAITAVD LADHRDDVVG RLSGGQQSRA SLAVALLDEP DLLVLDEPTV GLDPVLREDL
WNLFHRLADA GVAVFVSSHV MDEAERCDRL LLMRQGRILA DGTPAEIKAA AGVDDVEAAF
LALVRRDAA