Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0478 |
Symbol | |
ID | 4597377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 508897 |
End bp | 509646 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639775092 |
Product | ABC transporter related |
Protein accession | YP_921707 |
Protein GI | 119714742 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGGTG GGGCCTCCGT ACGCATAATT CAACGCATGG TGAAAAACGC GGTGGAGATC CGCGACCTCC ACGTCGTCCG GGGTCCGCAC ACCGTCCTCG AGCACCTCGA CCTGACGATC GGGGGCGGGG TCACCGGGCT GCTCGGCCCG TCCGGGTGCG GCAAGTCGAC GCTGATGCGC TGCCTGGTCG GCGTACAACG GATCCGCGGC GGGACCGTCG AGGTCTTCGG CCTGCCGGCG GGCAGCCGCC CGCTCCGGGA CCGGGTCGGC TACGTCACCC AGGCGGTCAG CGTCTACCAC GACCTGACCG TCGCCGAGAA CCTGCACTTC TTCGCGCGGG TGCTGGGCGC GGGCCGCGCC GAGGTCGACC GGGCGATCAC CGCCGTGGAC CTGGCCGACC ACCGCGACGA CGTCGTCGGA CGGCTCAGCG GTGGGCAGCA GTCGCGCGCG AGCCTGGCGG TCGCGCTGCT GGACGAGCCG GACCTGCTGG TGCTCGACGA GCCGACGGTG GGACTCGACC CGGTGCTCCG CGAGGACCTG TGGAACCTCT TCCACCGCCT GGCCGACGCC GGTGTCGCCG TCTTCGTCTC CAGCCACGTC ATGGACGAGG CCGAGCGCTG CGACCGGCTG CTGCTGATGC GGCAGGGCCG GATCCTCGCC GACGGGACGC CCGCCGAGAT CAAGGCCGCG GCCGGCGTCG ACGACGTCGA GGCCGCGTTC CTCGCGCTGG TCAGGAGGGA CGCGGCATGA
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Protein sequence | MPGGASVRII QRMVKNAVEI RDLHVVRGPH TVLEHLDLTI GGGVTGLLGP SGCGKSTLMR CLVGVQRIRG GTVEVFGLPA GSRPLRDRVG YVTQAVSVYH DLTVAENLHF FARVLGAGRA EVDRAITAVD LADHRDDVVG RLSGGQQSRA SLAVALLDEP DLLVLDEPTV GLDPVLREDL WNLFHRLADA GVAVFVSSHV MDEAERCDRL LLMRQGRILA DGTPAEIKAA AGVDDVEAAF LALVRRDAA
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